Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060862.seq
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126146-1|AAI26147.1| 303|Homo sapiens F-box and leucine-rich ... 31 4.8
BC126144-1|AAI26145.1| 303|Homo sapiens F-box and leucine-rich ... 31 4.8
BC071558-1|AAH71558.1| 436|Homo sapiens potassium voltage-gated... 31 4.8
AK126722-1|BAC86658.1| 303|Homo sapiens protein ( Homo sapiens ... 31 4.8
AF454548-1|AAM93549.1| 436|Homo sapiens voltage-gated potassium... 31 4.8
AF454547-1|AAM93548.1| 425|Homo sapiens voltage-gated potassium... 31 4.8
AF450110-1|AAP46291.1| 433|Homo sapiens voltage-gated potassium... 31 4.8
AF348982-1|AAL83909.1| 436|Homo sapiens voltage-gated potassium... 31 4.8
AC025750-1|AAY24039.1| 436|Homo sapiens unknown protein. 31 4.8
AB070604-1|BAB85520.1| 436|Homo sapiens voltage-gated K+ channe... 31 4.8
>BC126146-1|AAI26147.1| 303|Homo sapiens F-box and leucine-rich
repeat protein 17 protein.
Length = 303
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 163 LSTMNVCKPFKTRVRCDSVVVKKESNLNEQYLI 65
LS++N+C + RC V+ K+ NL E YL+
Sbjct: 170 LSSLNLCLNWIINDRCVEVIAKEGQNLKELYLV 202
>BC126144-1|AAI26145.1| 303|Homo sapiens F-box and leucine-rich
repeat protein 17 protein.
Length = 303
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 163 LSTMNVCKPFKTRVRCDSVVVKKESNLNEQYLI 65
LS++N+C + RC V+ K+ NL E YL+
Sbjct: 170 LSSLNLCLNWIINDRCVEVIAKEGQNLKELYLV 202
>BC071558-1|AAH71558.1| 436|Homo sapiens potassium voltage-gated
channel, subfamily G, member 3 protein.
Length = 436
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
>AK126722-1|BAC86658.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ44768 fis, clone BRACE3032631, highly similar
to Mus musculus F-box protein FBX13. ).
Length = 303
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 163 LSTMNVCKPFKTRVRCDSVVVKKESNLNEQYLI 65
LS++N+C + RC V+ K+ NL E YL+
Sbjct: 170 LSSLNLCLNWIINDRCVEVIAKEGQNLKELYLV 202
>AF454548-1|AAM93549.1| 436|Homo sapiens voltage-gated potassium
channel subunit Kv10.1b protein.
Length = 436
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
>AF454547-1|AAM93548.1| 425|Homo sapiens voltage-gated potassium
channel subunit Kv10.1a protein.
Length = 425
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
>AF450110-1|AAP46291.1| 433|Homo sapiens voltage-gated potassium
channel subunit Kv6.4 protein.
Length = 433
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
>AF348982-1|AAL83909.1| 436|Homo sapiens voltage-gated potassium
channel Kv10.1 protein.
Length = 436
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
>AC025750-1|AAY24039.1| 436|Homo sapiens unknown protein.
Length = 436
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
>AB070604-1|BAB85520.1| 436|Homo sapiens voltage-gated K+ channel
6.3 protein.
Length = 436
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 493 LFRGILKPEQLYASTMLHGSNSEFFQELXQLCSDPEREEQTRTIDSHKE 639
L R +LK L + LHG SE +++ ++C D +RE D H E
Sbjct: 22 LSRELLKDFPLRRVSRLHGCRSE--RDVLEVCDDYDRERNEYFFDRHSE 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,885,007
Number of Sequences: 237096
Number of extensions: 1668170
Number of successful extensions: 4516
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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