Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060862.seq
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p pro...    31   1.8  
AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan...    31   1.8  
AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA...    31   1.8  

>AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p protein.
          Length = 1637

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 574  VLGRTLSSNREALCSRITVPVSIFLG-KAGCWHCSLRHYSVVSL 446
            +L  TLS  R ALCS I  P  I LG + G ++ +L  Y +  +
Sbjct: 1195 ILDNTLSLIRNALCSVIIYPNQILLGTEDGLFYINLDQYEIARI 1238


>AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan
            protein.
          Length = 1613

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 574  VLGRTLSSNREALCSRITVPVSIFLG-KAGCWHCSLRHYSVVSL 446
            +L  TLS  R ALCS I  P  I LG + G ++ +L  Y +  +
Sbjct: 1171 ILDNTLSLIRNALCSVIIYPNQILLGTEDGLFYINLDQYEIARI 1214


>AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA
            protein.
          Length = 1637

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 574  VLGRTLSSNREALCSRITVPVSIFLG-KAGCWHCSLRHYSVVSL 446
            +L  TLS  R ALCS I  P  I LG + G ++ +L  Y +  +
Sbjct: 1195 ILDNTLSLIRNALCSVIIYPNQILLGTEDGLFYINLDQYEIARI 1238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,507,239
Number of Sequences: 53049
Number of extensions: 518236
Number of successful extensions: 1628
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)