Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060859.seq
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 103 5e-21
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 103 5e-21
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 99 5e-20
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 98 2e-19
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 96 6e-19
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 96 8e-19
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 95 1e-18
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 95 2e-18
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 93 4e-18
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 91 2e-17
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 91 3e-17
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 90 5e-17
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 89 1e-16
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 85 2e-15
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 85 2e-15
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 82 1e-14
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 81 2e-14
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 81 3e-14
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 80 6e-14
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 79 1e-13
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 78 2e-13
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 77 4e-13
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 75 2e-12
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 75 2e-12
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 74 4e-12
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 73 5e-12
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 73 5e-12
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 72 2e-11
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 71 3e-11
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 71 3e-11
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 70 5e-11
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 70 6e-11
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 69 1e-10
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 69 1e-10
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 69 1e-10
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 68 2e-10
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 67 3e-10
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 67 3e-10
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 66 8e-10
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 66 1e-09
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 65 1e-09
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 64 2e-09
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 64 4e-09
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 64 4e-09
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 62 1e-08
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 62 1e-08
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 61 3e-08
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 60 4e-08
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 60 7e-08
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 59 9e-08
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 59 1e-07
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 58 3e-07
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 58 3e-07
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 57 5e-07
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 57 5e-07
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 57 5e-07
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 55 1e-06
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 3e-06
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 54 4e-06
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 54 4e-06
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 54 4e-06
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 52 1e-05
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 50 4e-05
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 49 1e-04
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 48 2e-04
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 48 3e-04
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 48 3e-04
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 47 5e-04
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 44 0.003
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 44 0.003
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 44 0.004
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 42 0.011
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 41 0.025
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 41 0.025
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.033
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 39 0.10
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 39 0.13
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 38 0.23
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 38 0.23
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 38 0.31
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 38 0.31
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 37 0.41
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 37 0.41
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 36 0.71
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 36 0.94
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 36 0.94
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 36 1.2
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 35 1.6
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 34 2.9
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 34 2.9
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 34 2.9
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 3.8
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 33 5.0
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 33 5.0
UniRef50_Q4N6L0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 8.8
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 103 bits (246), Expect = 5e-21
Identities = 51/88 (57%), Positives = 57/88 (64%)
Frame = +1
Query: 244 NITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
N+ NGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SF
Sbjct: 77 NLHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSF 136
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GGF 507
WGATVITNLLSA+PY+G LV I GGF
Sbjct: 137 WGATVITNLLSAVPYMGNALVQWIWGGF 164
Score = 103 bits (246), Expect = 5e-21
Identities = 51/88 (57%), Positives = 57/88 (64%)
Frame = +1
Query: 244 NITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
N+ NGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SF
Sbjct: 264 NLHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSF 323
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GGF 507
WGATVITNLLSA+PY+G LV I GGF
Sbjct: 324 WGATVITNLLSAVPYMGNALVQWIWGGF 351
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/93 (45%), Positives = 54/93 (58%)
Frame = +2
Query: 17 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 196
RKTHP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 1 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFS 60
Query: 197 RVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
V +ICR+VNYG IIR LH FF F IY+
Sbjct: 61 SVVHICRDVNYGWIIRNLHANGASFF-FICIYL 92
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/93 (45%), Positives = 54/93 (58%)
Frame = +2
Query: 17 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 196
RKTHP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 188 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFS 247
Query: 197 RVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
V +ICR+VNYG IIR LH FF F IY+
Sbjct: 248 SVVHICRDVNYGWIIRNLHANGASFF-FICIYL 279
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 103 bits (246), Expect = 5e-21
Identities = 70/155 (45%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
WL + + NGASFFFICIYLH+GRGIYY S+ L YVLP
Sbjct: 78 WLLRT-LHANGASFFFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPW 136
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFV*IMLH*PDF--THFIFYYRSLXXY*Q 582
GQ+SFW ATVITNLL AIPYLG LV + GGF F HFI + L
Sbjct: 137 GQMSFWVATVITNLLYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMI 196
Query: 583 *SIYYFYT-KQDLITL*D*IET*XKIPFHPFFTFK 684
++ T + I L I+ KIPFHP+FTFK
Sbjct: 197 HLLFLHQTGSNNPIGLNSNID---KIPFHPYFTFK 228
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +2
Query: 8 RSIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEI 187
+ +R +HP+FKI NN LCLIIQI+TGLFL ++YTA+I +
Sbjct: 3 KPLRNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINL 62
Query: 188 AFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
AFY VN+ICR+VNYG ++RTLH FF F IY+
Sbjct: 63 AFYSVNHICRDVNYGWLLRTLHANGASFF-FICIYL 97
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VDNATLTRF+T QTGSNNP+GLN N+ K
Sbjct: 168 GFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNPIGLNSNIDK 218
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 99 bits (238), Expect = 5e-20
Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGASFFFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGAT
Sbjct: 2 NGASFFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGAT 61
Query: 436 VITNLLSAIPYLGTILVN*I*GGF-V*IMLH*PDFT-HFIFYYRSLXXY*Q*SIYYFYTK 609
VITNL SAIP++GT LV I GGF V FT HFI + L ++ +
Sbjct: 62 VITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAAS---LVHILFLH 118
Query: 610 QDLITL*D*IET-*XKIPFHPFFTFK 684
Q I + KIPFHP+FTFK
Sbjct: 119 QAGANNPLGISSQSDKIPFHPYFTFK 144
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G V NATLTRF+T Q G+NNPLG++ K
Sbjct: 84 GFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQAGANNPLGISSQSDK 134
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 97.9 bits (233), Expect = 2e-19
Identities = 50/93 (53%), Positives = 58/93 (62%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
WL S + NGASFFFIC+Y+HI RG+YY S+ K YVLP
Sbjct: 77 WLIRS-LHANGASFFFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPW 135
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQ+SFWGATVITNLLSA+PY+G LV I GGF
Sbjct: 136 GQMSFWGATVITNLLSAVPYMGDTLVQWIWGGF 168
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/95 (43%), Positives = 54/95 (56%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
S+RKTHP+ KI N LCLI QI+TGLFL ++YT++I A
Sbjct: 3 SLRKTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTA 62
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
F V +ICR+VNYG +IR+LH FF F +Y+
Sbjct: 63 FSSVTHICRDVNYGWLIRSLHANGASFF-FICLYM 96
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 96.3 bits (229), Expect = 6e-19
Identities = 50/93 (53%), Positives = 56/93 (60%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
WL N+ NGAS FF CIYLHIGRG+YY S LK YVLP
Sbjct: 34 WLLR-NLHTNGASMFFFCIYLHIGRGLYYGSHTLKKTWYTGTMLLLMLMATAFLGYVLPW 92
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQ+SFWGATVITNL SA+PY+G LV+ GGF
Sbjct: 93 GQMSFWGATVITNLSSALPYIGPTLVHWTWGGF 125
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 134 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH F F IY+
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFC-IYL 53
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 95.9 bits (228), Expect = 8e-19
Identities = 61/145 (42%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGAS FFIC+++HIGRG+YY S+ YVLP GQ+SFWGAT
Sbjct: 85 NGASMFFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGAT 144
Query: 436 VITNLLSAIPYLGTILVN*I*GGFV*IMLH*PDF--THFIFYYRSLXXY*Q*SIYYFYTK 609
VITNLLSAIPY+GT LV I GGF F HFI + + ++ T
Sbjct: 145 VITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETG 204
Query: 610 QDLITL*D*IET*XKIPFHPFFTFK 684
+ T KIPFHP++T K
Sbjct: 205 SNNPT--GIPSNTDKIPFHPYYTIK 227
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
+IRKTHP+ KI+NN +CLI+QI+TGLFL ++YT++ A
Sbjct: 3 NIRKTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTA 62
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
F V +ICR+VNYG IIR +H FF+ F++I
Sbjct: 63 FSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHI 98
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VD ATLTRF+ +TGSNNP G+ N K
Sbjct: 167 GFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNPTGIPSNTDK 217
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 95.1 bits (226), Expect = 1e-18
Identities = 48/84 (57%), Positives = 54/84 (64%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGAS FFIC++LHIGRG+YY SF YVLP GQ+SFWGAT
Sbjct: 85 NGASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGAT 144
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VITNLLSAIPY+GT LV I GG+
Sbjct: 145 VITNLLSAIPYIGTDLVQWIWGGY 168
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 IRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAF 193
+RK +P+ K+IN+ CLI+QI TGLFL ++Y+ + AF
Sbjct: 4 MRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAF 63
Query: 194 YRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+ +I R+VNYG IIR LH FF+ F++I
Sbjct: 64 SSIAHITRDVNYGWIIRYLHANGASMFFICLFLHI 98
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VD+ TLTRF+T +TGSNNPLG+ + K
Sbjct: 167 GYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNPLGITSHSDK 217
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/87 (51%), Positives = 56/87 (64%)
Frame = +1
Query: 244 NITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
N+ NGAS FF+ IYLHIGRG+YY SF++K L YVLP GQ+SF
Sbjct: 92 NLHANGASAFFMLIYLHIGRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSF 151
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GG 504
WGATVITNL A+PY+G+ L+ + GG
Sbjct: 152 WGATVITNLFGAVPYVGSTLMEWVWGG 178
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LH FF+ +++I
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 93.5 bits (222), Expect = 4e-18
Identities = 46/84 (54%), Positives = 54/84 (64%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGAS FFIC++LH+GRG+YY S+ YVLP GQ+SFWGAT
Sbjct: 85 NGASMFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGAT 144
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VITNLLSAIPY+G+ LV I GGF
Sbjct: 145 VITNLLSAIPYIGSDLVQWIWGGF 168
Score = 79.4 bits (187), Expect = 8e-14
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
+IRKTHP+ KIIN+ +CLIIQI+TGLFL ++YT++ A
Sbjct: 3 NIRKTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTA 62
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
F V +ICR+VNYG +IR LH FF+ F+++
Sbjct: 63 FSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHV 98
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VD ATLTRF+ +TGSNNP GL + K
Sbjct: 167 GFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNPSGLPSDADK 217
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/84 (54%), Positives = 54/84 (64%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
N ASFFFI +Y+HI RG+Y+ SF LK + YVLP GQ+SFWGAT
Sbjct: 82 NTASFFFIFLYIHIARGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGAT 141
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VITNLLSAIPY+GT + I GGF
Sbjct: 142 VITNLLSAIPYIGTSITQWIWGGF 165
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 122 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR H FF F F+YI
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFF-FIFLYI 93
Score = 39.5 bits (88), Expect = 0.076
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VDN TLTRF+T +TGS+NPLG++ N+ K
Sbjct: 164 GFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNPLGISNNIDK 214
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 90.6 bits (215), Expect = 3e-17
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
WL S I NGAS FF C+Y HIGRG+YY + + V L YVLP
Sbjct: 81 WLLRS-IHANGASAFFFCMYAHIGRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPW 139
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQ+SFWGATVITNLL+AIP +G+ LV + GGF
Sbjct: 140 GQMSFWGATVITNLLTAIPMVGSPLVKWVWGGF 172
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLF 280
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++H F F
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFF 96
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 89.8 bits (213), Expect = 5e-17
Identities = 64/151 (42%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 438
GAS FFICIY+HI RG+YY + K V L YVLP GQ+SFW ATV
Sbjct: 78 GASLFFICIYIHIARGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATV 137
Query: 439 ITNLLSAIPYLGTILVN*I*GGFV*IMLH*PDFT-----HFI--FYYRSLXXY*Q*SIYY 597
ITNLL+AIPYLG + + GGF ++ P T HFI F SL ++
Sbjct: 138 ITNLLTAIPYLGVAVTTWLWGGF---SINDPTLTRFCALHFILPFIIISLSSIHIILLHN 194
Query: 598 FYTKQDLITL*D*IET*XKIPFHPFFTFKGF 690
+ L T D I+ KIPFHP+ ++K F
Sbjct: 195 EGSNNPLGTNSD-ID---KIPFHPYHSYKDF 221
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +2
Query: 122 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYIS 298
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ H + FF+ +I+I+
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 88.6 bits (210), Expect = 1e-16
Identities = 45/82 (54%), Positives = 51/82 (62%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 438
GAS FFICIY HI RG+YY S+ K V L YVLP GQ+SFW ATV
Sbjct: 78 GASLFFICIYTHIARGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATV 137
Query: 439 ITNLLSAIPYLGTILVN*I*GG 504
ITNLL+AIPYLGT + + GG
Sbjct: 138 ITNLLTAIPYLGTTMTXWLWGG 159
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2
Query: 122 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIY 292
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ H + F F IY
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLF-FICIY 87
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = +1
Query: 244 NITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
N+ NGAS FF+C+YLHI R IY+ ++ K YVLP GQ+SF
Sbjct: 88 NLHANGASIFFLCVYLHISRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSF 147
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GGF 507
W ATVITNL SAIPY+G +V I G F
Sbjct: 148 WAATVITNLFSAIPYIGNTIVLWIWGSF 175
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LH FFL +++I
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
Query: 296 S 298
S
Sbjct: 106 S 106
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/89 (52%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 ITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQIS 420
I NGASFFFI +YLHIGR +YY S+ L YVLP GQ+S
Sbjct: 81 IHANGASFFFIWVYLHIGRNLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMS 140
Query: 421 FWGATVITNLLSAIPYLGTILVN*I*GGF 507
FWGATVITNLLSAIP++GT V + GGF
Sbjct: 141 FWGATVITNLLSAIPWIGTDFVLFVWGGF 169
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +2
Query: 14 IRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAF 193
+ K +PI ++N+ + L+I II+GL L ++YT N +AF
Sbjct: 3 LTKRNPILVLVNDFVIDSPLPTNLTYFWNFGSLLGVNLVILIISGLTLAMHYTPNTLLAF 62
Query: 194 YRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
V +I R+VN G ++R +H FF F ++Y+
Sbjct: 63 SSVEHIMRDVNNGWLLRYIHANGASFF-FIWVYL 95
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/93 (48%), Positives = 53/93 (56%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
W+ S I NGASFFF +YLHIGRG+Y + L V + YV P
Sbjct: 82 WMFRS-IHANGASFFFFWVYLHIGRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPW 140
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQI GATVIT+LLSAIPY+G LV + GGF
Sbjct: 141 GQIFLGGATVITSLLSAIPYMGGFLVKWVWGGF 173
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++H FF F ++Y+
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFF-WVYL 101
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 81.4 bits (192), Expect = 2e-14
Identities = 54/150 (36%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Frame = +1
Query: 244 NITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
NI NG+S FFICIY HI RG+YY S+ K V Y LP GQ+S+
Sbjct: 96 NIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSY 155
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GGFV*IMLH*PDF--THFIFYYRSLXXY*Q*SIYY 597
WGATVITN+LS P +G ++ + GG+ F HF+ + + +++
Sbjct: 156 WGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFL-HLFF 214
Query: 598 FYTKQDLITL*D*IET*XK-IPFHPFFTFK 684
+ K L IE+ +PFHPF+T K
Sbjct: 215 LHEKGSNNPL--GIESGTMCVPFHPFYTIK 242
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 196
R T+ + KI+N+ LCL+IQ+++GL L+ +YTA+ ++AF
Sbjct: 20 RSTNKLVKIMNDSFYDLPCPVNLNAWWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFD 79
Query: 197 RVNYICRNVNYG*IIRTLHVM-ELHFFLFAFIYIS 298
V +I RNV G ++R +H FF+ + +I+
Sbjct: 80 SVVHIMRNVEKGWMLRNIHANGSSMFFICIYAHIA 114
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 81.0 bits (191), Expect = 3e-14
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 67 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 246
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 247 ITCN-GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
ITC G + ++ + +++ ++ + YVLP GQ+SF
Sbjct: 84 ITCKRGINLLYLFMSSRWSSNMFW-ILHILFTWTTGVVLLLLVMMTAFVGYVLPWGQMSF 142
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GGF 507
WGATVITNL+SA+PY+GT++V + GGF
Sbjct: 143 WGATVITNLVSAVPYMGTMIVQWLWGGF 170
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VDNATLTRF++ QTGSNNP G+++NL K
Sbjct: 169 GFAVDNATLTRFFSFHFILPFIIAAMVILHLLFLHQTGSNNPAGMSKNLDK 219
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 79.8 bits (188), Expect = 6e-14
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGAS FFI +YLHI RG+YY S++ ++V YVLP GQ+SFWG
Sbjct: 90 NGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWG 149
Query: 430 ATVITNLLSAIPYLGTILVN*I*GGF 507
ATVIT+L SAIP +G +V + GGF
Sbjct: 150 ATVITSLASAIPVVGDTIVTWLWGGF 175
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/60 (38%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +H FF+ +++I
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VDNATL RF++ Q GSNNPLG++ + K
Sbjct: 174 GFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDK 224
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/94 (42%), Positives = 53/94 (56%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
S+RK+HP+ KI N+ LCLI QI+TGLFL ++YT++I A
Sbjct: 3 SLRKSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTA 62
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIY 292
F V +ICR+VNYG +IR +H FF F IY
Sbjct: 63 FSSVTHICRDVNYGWLIRNMHANGASFF-FICIY 95
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLK 333
WL N+ NGASFFFICIY HIGRG+YY S+ K
Sbjct: 77 WLIR-NMHANGASFFFICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGAS FF +Y+HIGRGIYY + V YVLP GQ+S+W +
Sbjct: 83 NGASMFFFFMYIHIGRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASV 142
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VIT+LLS IPY+G LV I GGF
Sbjct: 143 VITSLLSTIPYIGPSLVEWIWGGF 166
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H+ F F F+YI
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFF-FMYI 94
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFN--LKYV*LXXXXXXXXXXXXXXXXYVL 402
WL + C GAS FF +Y+H+ RG+YY S+ + + + YVL
Sbjct: 90 WLLRNMHAC-GASMFFFAVYVHMLRGLYYGSYKEPREVLWILGVIIYLLMMATGFMGYVL 148
Query: 403 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
P GQ+SFWGATVITNL SAIPY G +V + GG+
Sbjct: 149 PWGQMSFWGATVITNLFSAIPYFGESIVTLLWGGY 183
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 131 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +H F FA +Y+
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFA-VYV 109
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGAS FFI +Y+H+ RG+YY S+ + + YVLP GQ+SFWG
Sbjct: 96 NGASMFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWG 155
Query: 430 ATVITNLLSAIPYLGTILVN*I*GGF 507
ATVITNL SAIP +G +V + GGF
Sbjct: 156 ATVITNLFSAIPVVGDDIVTLLWGGF 181
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +H F F +Y+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMF-FIVVYV 107
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
++RK+HP+ KIIN+ +CL++QIITGLFL ++YTA+ A
Sbjct: 3 NLRKSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSA 62
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYIS 298
F + +ICR+VNYG +IR H FF+ +I+I+
Sbjct: 63 FSSIAHICRDVNYGWVIRYTHANGASMFFICLYIHIA 99
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLK 333
NGAS FFIC+Y+HI RG+YY S+ K
Sbjct: 85 NGASMFFICLYIHIARGLYYGSYLFK 110
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = +2
Query: 20 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 199
KTHPI + N+ +CLIIQI+TG+FL ++YT ++++AF
Sbjct: 5 KTHPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFIS 64
Query: 200 VNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
V +I R+VNYG +IR LH FF F F+Y+
Sbjct: 65 VEHIMRDVNYGWLIRYLHANTASFF-FIFVYL 95
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSF 324
N ASFFFI +YLHIGRG+YY S+
Sbjct: 84 NTASFFFIFVYLHIGRGLYYGSY 106
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGAS FF+ ++LH+ R +YY S + + + + YVLP GQ+SFWG
Sbjct: 84 NGASLFFVAVFLHLFRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWG 143
Query: 430 ATVITNLLSAIPYLGTILVN*I*GGF 507
ATVIT+L+SA+P +GT LV + GGF
Sbjct: 144 ATVITSLVSAVPIVGTDLVYYLWGGF 169
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H+ FF+ F+++
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
N AS FF +YLHIGRG+YY S+ YVLP GQ+S WG
Sbjct: 84 NTASAFFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWG 143
Query: 430 ATVITNLLSAIPYLGTILVN*I*GG 504
ATVITNL+SAIP++G +V I GG
Sbjct: 144 ATVITNLMSAIPWIGQDIVEFIWGG 168
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 IRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAF 193
I K+HP+ KI+N+ ALCL IQI+TG+ L ++YT ++ AF
Sbjct: 3 ILKSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAF 62
Query: 194 YRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
V +I R+VN G ++R LH FF +++I
Sbjct: 63 NSVEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/93 (39%), Positives = 50/93 (53%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
W+ S + GAS FF +Y H+GRG+YY S+ YVLP
Sbjct: 79 WILRS-VHVAGASSFFFFMYCHVGRGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPA 137
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQ+SFWGATVI+N L+ IP+ G L+ + GG+
Sbjct: 138 GQMSFWGATVISNFLTVIPFFGDTLLKYVLGGY 170
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +2
Query: 125 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIY 292
L +QI++G+ L++YY +E AF + +I R+VN G I+R++HV F F F+Y
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFF-FMY 97
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 ITCNGASFFFICIYLHIGRGIYYKSFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
I N +S F IYLH+ +G+ + SF++ K + YVLP GQ+S
Sbjct: 76 IHLNVSSIIFFLIYLHMTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSL 135
Query: 424 WGATVITNLLSAIPYLGTILVN*I*GGF 507
WGATVITNLLSAIP +G ++V I GG+
Sbjct: 136 WGATVITNLLSAIPVIGKMMVEWIWGGY 163
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 116 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
+L + IQIITGLFLT YY N E F + I YG ++ +H + + +F IY+
Sbjct: 33 SLIMSIQIITGLFLTFYY-ENSENCFDSIYIIHIETFYGVLVHFIH-LNVSSIIFFLIYL 90
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
N AS FF +YLHIGRG+YY S+ YVLP GQ+S WGAT
Sbjct: 84 NTASAFFFLVYLHIGRGLYYASYRAPRT------------LAWVSLYVLPYGQMSLWGAT 131
Query: 436 VITNLLSAIPYLGTILVN*I*GG 504
VITNL+SAIP++G +V + GG
Sbjct: 132 VITNLISAIPWIGQDIVEFVWGG 154
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 14 IRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAF 193
I K+HP+ K++N A+CLIIQI+TG+ L ++Y ++ AF
Sbjct: 3 ILKSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAF 62
Query: 194 YRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+ +I R+VN G +IR LH FF +++I
Sbjct: 63 NSIEHIMRDVNNGWLIRYLHSNTASAFFFLVYLHI 97
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGAS FFI +YLHI RG+YY S+ + + YVLP GQ+SFWG
Sbjct: 99 NGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWG 158
Query: 430 ATVITNLLSAIPYLGTILVN*I*GG 504
ATVIT L AIP +G + + GG
Sbjct: 159 ATVITGLFGAIPGIGHSIQTWLLGG 183
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +2
Query: 116 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIY 292
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LH FF+ +++
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 293 I 295
I
Sbjct: 112 I 112
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/84 (44%), Positives = 47/84 (55%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGAS FFI +YLHI +G+++ S+ LK V + YVL Q+SFW A
Sbjct: 82 NGASLFFIFLYLHIFKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAV 141
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VIT+LLS IP G +V I GF
Sbjct: 142 VITSLLSVIPIWGPTIVTWIWSGF 165
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+ LI QI+TG FL YYT + +AF V YI VN+G + R H FF+F +++I
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGAS FF+ +Y+HI RG+YY S+ + + YVLP GQ+SFWG
Sbjct: 99 NGASLFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWG 158
Query: 430 ATVITNLLSAIPYLGTILVN*I*GG 504
ATVIT L AIP +G + + GG
Sbjct: 159 ATVITGLFGAIPGVGEAIQTWLLGG 183
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 116 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIY 292
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LH FFL +I+
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 293 I 295
I
Sbjct: 112 I 112
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWG 429
NGASFFF+ +++H+ +G+YY S+ V L Y GQ+S WG
Sbjct: 84 NGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143
Query: 430 ATVITNLLSAIPYLGTILVN*I*GGF 507
ATVITNL SAIP++G +V+ + GGF
Sbjct: 144 ATVITNLFSAIPFVGNDIVSWLWGGF 169
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
+ RK++ ++N+ LCL+IQI+TG+F+ ++Y++NIE+A
Sbjct: 2 AFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELA 61
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELHFF 274
F V +I R+V+ G I+R LH FF
Sbjct: 62 FSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWG 429
NGASFFF+ +++H+ +G+YY S+ V L Y GQ+S WG
Sbjct: 84 NGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143
Query: 430 ATVITNLLSAIPYLGTILVN*I*GGF 507
ATVITNL SAIP++G +V+ + GGF
Sbjct: 144 ATVITNLFSAIPFVGNDIVSWLWGGF 169
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
+ RK++ ++N+ LCL+IQI+TG+F+ ++Y++NIE+A
Sbjct: 2 AFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELA 61
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELHFF 274
F V +I R+V+ G I+R LH FF
Sbjct: 62 FSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 68.1 bits (159), Expect = 2e-10
Identities = 42/93 (45%), Positives = 50/93 (53%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 408
WL S I N ASF F +++H RGI SF L + YVLP
Sbjct: 70 WLVRS-IHSNTASFVFFLMFMHFFRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPW 128
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQ+SFWGATVI NLLS +PY G +LV + GGF
Sbjct: 129 GQMSFWGATVIINLLSILPY-GKMLVVWLWGGF 160
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGASF F+ +Y H+ +G+ Y SF L L YV+P G +SFW AT
Sbjct: 82 NGASFIFMTMYAHMFKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAAT 141
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VIT+ +SAIP LG ++ I GG+
Sbjct: 142 VITSFMSAIPILGESILYWIWGGY 165
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIY 292
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H+ F+F +Y
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGAS-FIFMTMY 92
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
NGAS FF+ IYLHI +G+ S+ L V + YVL GQ+S+W A
Sbjct: 74 NGASMFFLFIYLHIFKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAV 133
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VIT+L++++PYLG +V I G F
Sbjct: 134 VITSLMTSVPYLGKYMVWWIWGSF 157
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H FFLF +++I
Sbjct: 30 IMLMSQIITGFFLTFYYTAG--DAFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 66.1 bits (154), Expect = 8e-10
Identities = 37/86 (43%), Positives = 45/86 (52%)
Frame = +1
Query: 247 ITCNGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 426
I +G S F +YLHI RG+ Y SF V YVLP G +S+W
Sbjct: 78 IHSSGVSLFMFIMYLHILRGLIYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYW 137
Query: 427 GATVITNLLSAIPYLGTILVN*I*GG 504
G TV+TN+LSAIP +G LV I GG
Sbjct: 138 GMTVVTNMLSAIPMVGVYLVETIWGG 163
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
N A+F CIY+HIGRG+YY SF L V YVLP GQ+++W A
Sbjct: 86 NVANFMLGCIYVHIGRGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQ 145
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VI+++++AIP +G + + GG+
Sbjct: 146 VISSMVTAIPKVGGEVAMWVWGGY 169
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +2
Query: 122 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H+ +F L IY+
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFML-GCIYV 97
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 65.3 bits (152), Expect = 1e-09
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 432
G + F C+Y+HIGR ++Y S+ + + L YVLP GQ+S+WGA
Sbjct: 98 GVTMLFACLYIHIGRSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGA 157
Query: 433 TVITNLLSAIPYLGTILVN*I*GG--FV*IMLH*PDFTHFIFYYRSLXXY*Q*SIYYFYT 606
TVI N + AIP +G L + GG + LH HF + L
Sbjct: 158 TVILNAVHAIPLIGQPLSELLLGGDTLGNVALHRLFVLHFTMAFAILGVIALHVAALHVV 217
Query: 607 KQDLITL*D*IET*XKIPFHPFFTFK-GF 690
K + + D + +PFHP++T + GF
Sbjct: 218 KSNNPSGVDPVNPSQTLPFHPYYTSRDGF 246
Score = 39.1 bits (87), Expect = 0.10
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +2
Query: 125 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
+ I +GLFL I YT +I AF V I R V G IR+LH+ + LFA +YI
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGV-TMLFACLYI 108
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +H FF+ F+++
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Score = 49.2 bits (112), Expect = 9e-05
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNL 330
NGAS FFIC++LH+GRG+YY S+N+
Sbjct: 66 NGASMFFICLFLHVGRGVYYGSYNM 90
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFWG
Sbjct: 51 NGASFFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFWG 108
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 432
GAS FF+ +YLH+ RG+ Y S+ + V + Y+LP GQ+S+WGA
Sbjct: 107 GASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGA 166
Query: 433 TVITNLLSAIPYLGTILVN*I*GGFV 510
VI NL SAIP++G L I G +V
Sbjct: 167 QVIVNLFSAIPFIGPDLALLIRGDYV 192
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H F F +Y+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAF-FVVVYL 117
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGF 169
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G VDNATLTRF+ +TGSNNP GLN + K
Sbjct: 168 GFSVDNATLTRFFAFHFLFPFVIAGATVLHLLFLHETGSNNPAGLNSDADK 218
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 62.1 bits (144), Expect = 1e-08
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKS-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 432
+GASF F+ ++LH+GR ++Y S F YVLP GQ+SFWGA
Sbjct: 92 SGASFVFLFLFLHLGRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGA 151
Query: 433 TVITNLLSAIPYLGTILVN*I*GGFV*IMLH*PDFTH-FIFYYR 561
TVITNLLS P L+ + GG+ +H P F+F+Y+
Sbjct: 152 TVITNLLSPFP----SLIEWVSGGY---CVHSPTLKRFFLFHYQ 188
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHF-FLFAFIYI 295
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H F FLF F+++
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
Query: 296 SDEEF 310
F
Sbjct: 106 GRAMF 110
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +2
Query: 11 SIRKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIA 190
+ RK++ ++N+ LCL+IQI+TG+F+ ++Y++NIE+A
Sbjct: 2 AFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELA 61
Query: 191 FYRVNYICRNVNYG*IIRTLHVMELHFF 274
F V +I R+V+ G I+R LH FF
Sbjct: 62 FSSVEHIMRDVHNGYILRYLHANGASFF 89
Score = 37.5 bits (83), Expect = 0.31
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWG 429
NGASFFF+ +++H+ +G+YY S+ V L Y GQ+S WG
Sbjct: 84 NGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/69 (46%), Positives = 38/69 (55%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 438
GAS F+ YLHI RG+ Y L + YVLP GQ+S+WGATV
Sbjct: 81 GASLVFLLTYLHILRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATV 140
Query: 439 ITNLLSAIP 465
ITNLLS+IP
Sbjct: 141 ITNLLSSIP 149
Score = 40.3 bits (90), Expect = 0.044
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHF-FLFAFIYI 295
+ IQIITG+FL YT ++ A+Y + +I R + G R +H FL +++I
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 60.1 bits (139), Expect = 5e-08
Identities = 33/71 (46%), Positives = 37/71 (52%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 438
GAS F YLHI RG+ Y L + YVLP GQ+S+WGATV
Sbjct: 247 GASLVFFLTYLHILRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATV 306
Query: 439 ITNLLSAIPYL 471
ITNLLS IP L
Sbjct: 307 ITNLLSGIPAL 317
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHV--MELHFFL 277
+ IQI+TG+FL Y+ I A+Y + +I R + G R +H L FFL
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFL 254
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +2
Query: 20 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 199
K+HP+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNS 64
Query: 200 VNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
+ +I R+VN G ++R LH FF +++I
Sbjct: 65 IEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSF 324
N AS FF +YLHIGRG+YY S+
Sbjct: 84 NTASAFFFLVYLHIGRGMYYGSY 106
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 59.3 bits (137), Expect = 9e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +1
Query: 265 SFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 444
S F +Y+HIGR +YY S+ + V Y+LP Q+S+W ATV+T
Sbjct: 77 SIIFFLVYVHIGRSLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVLT 136
Query: 445 NLLSAIPYLGTILVN*I*GGF 507
+++ ++P +G ++ + + GGF
Sbjct: 137 SIILSVPVVGGLIFSYVVGGF 157
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +1
Query: 211 LPKCKLWLNNSNITCNGASFFFICIYLHIGRGIYYKSFNL 330
LP+ KLWL+ S + NGAS FF+C+++HIGRG+YY SF L
Sbjct: 6 LPRRKLWLSYSLPSRNGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 432
GAS FFI +YLH+ RG+ Y S + V + YVLP GQ+SFWGA
Sbjct: 100 GASLFFIGVYLHMFRGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGA 159
Query: 433 TVITNLLSAIPYLGTILVN*I*GGFV 510
VI +L AIP +G L I G ++
Sbjct: 160 KVIISLFGAIPVIGNGLDEWIMGDYL 185
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 125 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H F F +Y+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLF-FIGVYL 110
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 ASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
AS F+ IY+H+ GIYY S+ + + + Y+LP GQ+S+W A
Sbjct: 98 ASVVFLVIYIHMFTGIYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQ 157
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VITNL IP++G LV I G F
Sbjct: 158 VITNLFGGIPFIGDDLVVWIRGNF 181
Score = 36.7 bits (81), Expect = 0.54
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 131 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
I +I+G+FL +YY + ++AF VNY I + V +G + R +H + +F IYI
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAAS-VVFLVIYI 107
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTL 250
LCLI QIITGLFL ++YTA+ +AF + +ICR+VN G ++R+L
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSL 46
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSF 324
WL N+ NGASFFFICIYLHIGRG+YY SF
Sbjct: 61 WLLR-NLHANGASFFFICIYLHIGRGMYYGSF 91
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 432
GAS FF +Y+H+ RG+YY S+ + V L Y L GQ+S+W A
Sbjct: 101 GASLFFAALYIHMFRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAA 160
Query: 433 TVITNLLSAIPYLGTILVN*I*GGF 507
VIT L S +P++G + + GGF
Sbjct: 161 QVITGLFSVVPFVGEKIRIWVLGGF 185
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H++ F FA +YI
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLF-FAALYI 111
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 432
GAS FFI IYLH+ RG+ S+ + + + Y+LP GQ+S+WGA
Sbjct: 94 GASMFFIVIYLHMFRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGA 153
Query: 433 TVITNLLSAIPYLGTILVN*I*GGFV 510
VI NL +A+P +G L + G FV
Sbjct: 154 QVIVNLFAAVPVVGEDLSVWVRGDFV 179
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H F F IY+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMF-FIVIYL 104
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 WLNNSNITCNGASFFFICIYLHIGRGIYYKSFNLK--YV*LXXXXXXXXXXXXXXXXYVL 402
W+ S + GAS FF Y H+ RG++Y ++ LK +V YVL
Sbjct: 78 WIIRS-LHMGGASLFFALTYAHVARGVFYGAY-LKNPHVWYSGLSLYILSMGVGFLGYVL 135
Query: 403 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFV 510
P G +S+WG TVITN+++ +P G ++ GGFV
Sbjct: 136 PWGVMSYWGLTVITNMMTVVPG-GARALDWFQGGFV 170
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIY 292
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH+ F FA Y
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLF-FALTY 96
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 122 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 247
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 53.6 bits (123), Expect = 4e-06
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGA 432
GAS FF YLHI R +YY + Y+ + Y L GQ S+W A
Sbjct: 84 GASLFFFACYLHIFRAMYYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAA 143
Query: 433 TVITNLLSAIPYLGTILVN*I*GGF 507
TVIT AIP++G L + + GG+
Sbjct: 144 TVITGFTRAIPWVGDTLYSFLVGGY 168
Score = 39.5 bits (88), Expect = 0.076
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 131 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFA 283
+QI++GL L ++Y +AF + +I R+V +G ++R H + F FA
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFA 91
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 438
G SF+F +++HI +G++Y S + + YVLP GQ+SFWGATV
Sbjct: 76 GVSFYFFFMFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATV 135
Query: 439 ITNLL 453
I+NLL
Sbjct: 136 ISNLL 140
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/65 (46%), Positives = 33/65 (50%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 438
GASF FI YLHI RG+ Y L + YVLP GQ+SFW TV
Sbjct: 81 GASFVFILTYLHILRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTV 140
Query: 439 ITNLL 453
ITNLL
Sbjct: 141 ITNLL 145
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHF-FLFAFIYI 295
+ IQI+ G+ L + + A+Y V +I R + G R +H F F+ +++I
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = -3
Query: 276 KKK*SSITCNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDPIF 97
KK + + +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P F
Sbjct: 3 KKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEPKF 62
Query: 96 HQEEILDGLGKSINELLMI 40
H E+L+G GKS + L I
Sbjct: 63 HHTEMLEGAGKSTSASLSI 81
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +3
Query: 258 WSFIFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNR 437
WS +L T+R+R LL + + + +Y Y ++N FH L +R NI LG N
Sbjct: 43 WSLYALHLPFPTHRSRPLLWLISPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNS 102
Query: 438 NYKSIICNPLFRN 476
N+K I NP++RN
Sbjct: 103 NHKPTISNPVYRN 115
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1
Query: 409 GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
GQ+ FWGATVITN LS IPY G +VN I GGF
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGF 37
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 GASFFFICIYLHIGRGIYYKSFNLKYV-*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 435
GAS FIC+ HIGRG+YY S++ V Y+LP Q+S+W
Sbjct: 98 GASLVFICLLGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGV 157
Query: 436 VITNLLSAIPYLGTILVN*I*GGF 507
VI+ + ++P +G L + + G +
Sbjct: 158 VISTIFLSLPVIGPHLYSFLLGSY 181
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 403 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGF 507
P GQ+SFWGATVITNL+SAI Y+G +V + GGF
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGF 36
Score = 39.1 bits (87), Expect = 0.10
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = +3
Query: 501 GICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLXK 653
G V +ATL RFYT QTGS NP+GLN N+ K
Sbjct: 35 GFSVSDATLNRFYTFHFISDFVILFLVLIHLVFLHQTGSTNPMGLNSNMNK 85
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 429
+G S FI +Y H+ RG+ Y S + V + YVLP G +S+W
Sbjct: 89 DGVSLIFILLYTHMFRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWA 148
Query: 430 ATVITNLLSAIPYLGTILVN*I*GG 504
VIT+++ A+P +G L GG
Sbjct: 149 GEVITSIMHALPVVGPSLTTLTRGG 173
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHV 256
L +++Q+I+G FL +Y + AF V I + +G +IR +HV
Sbjct: 43 LMIVLQLISGFFLMAHYVPTSQDAFASVQGIMYDTKWGWLIRYMHV 88
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/53 (35%), Positives = 36/53 (67%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFL 277
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +H FL
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFL 82
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 128 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHV-MELHFFLFAFIYI 295
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H + FF+ F++I
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHI 94
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 250 TCNGASFFFICIYLHIGRGIYYKSFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 423
T GA+FF +YLH+ GIYY ++ + V + Y+LP GQ+S+
Sbjct: 90 TRTGANFFMAIVYLHMFTGIYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSY 149
Query: 424 WGATVITNL 450
WG V T +
Sbjct: 150 WGFIVTTEI 158
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 122 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 253
C ++Q+ TG +T YY + AF V YI N+G +IR++H
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVH 86
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 253
L ++Q +TGLFL +YY E AF V I V +G IR+LH
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLH 84
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 128 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 253
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMH 94
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 41.1 bits (92), Expect = 0.025
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 504
Y+LP Q+SFW TV TN AIP +G LV + GG
Sbjct: 140 YLLPWSQLSFWATTVATNSAGAIPVIGGYLVEFLRGG 176
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 131 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVM 259
IQ++TG+ L IYY + + AF V I +V +G +IR H +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAV 92
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +3
Query: 462 PLFRNYISKLNLRGICVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNR 641
P N + + G VDNATLTRF+ QTGS NPLG+N
Sbjct: 10 PYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTGSPNPLGINS 69
Query: 642 NLXK 653
N+ K
Sbjct: 70 NVDK 73
Score = 38.3 bits (85), Expect = 0.18
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 436 VITNLLSAIPYLGTILVN*I*GGFV*IMLH*PDFTHFIFYYRSLXXY*Q*SIYYFYTKQD 615
VITNLLSAIPYLG L + GGF F F F + + +I+ + Q
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALT-TIHLLFLHQT 59
Query: 616 LITL*D*IET-*XKIPFHPFFTFK 684
I + KIPFHP+FT+K
Sbjct: 60 GSPNPLGINSNVDKIPFHPYFTYK 83
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 125 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 229
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHV-MELHFFLFAFIYI 295
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H M FF+ +++
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLGTIL 483
YVLP +S+WG TV +N+L+ +P +GT L
Sbjct: 104 YVLPCTMMSYWGLTVFSNILATVPVIGTWL 133
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKS 321
NGAS FFI +YLH+ RG+YY S
Sbjct: 84 NGASLFFIVVYLHVLRGMYYGS 105
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 37.9 bits (84), Expect = 0.23
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 273 FYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 425
FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 62 FYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 504
Y+LP Q+S+W T++TN+L +P +G L + GG
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGG 81
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 262 ASFFFICIYLHIGRGIYYKSFNLKYV 339
AS FFI +YLHI RG+YY S+ ++V
Sbjct: 23 ASMFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFI 289
L ++Q++TG+ L +YY +E A+ V +I V G +R++H + + L +
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVV 98
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 37.1 bits (82), Expect = 0.41
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 256 NGASFFFICIYLHIGRGIYYKSFNLK 333
NGAS FF+ +YLHI +G++ S+ LK
Sbjct: 25 NGASLFFVFLYLHIFKGLFMMSYRLK 50
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 36.3 bits (80), Expect = 0.71
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 128 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFI 289
+++ ITGL L IYY+ + A+ + I +V G ++R +H + HF + I
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVI 139
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 35.9 bits (79), Expect = 0.94
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 125 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFL 277
+ +Q +TG+ L YY + A+ V YI +G +IR +H +F +
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLM 106
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 35.9 bits (79), Expect = 0.94
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 128 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFIYI 295
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH HF A I +
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLH----HFMAQAMIVL 96
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 504
Y+LP Q+++W TV TN+ SA+P +G + + GG
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVGAEVRELLLGG 205
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLG 474
Y LP +S+WG TV +N+L+ IP +G
Sbjct: 133 YTLPCTSMSYWGLTVFSNILATIPLIG 159
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 119 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELHFFLFAFI 289
L ++++++TG L Y+ + A+ V+YI V+ G +R LH H + A +
Sbjct: 46 LMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIV 102
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 504
Y+LP + ++WG V TN++ +P +G +L + I GG
Sbjct: 146 YLLPWDERAYWGTIVGTNMIGLVPVVGPLLKSAIRGG 182
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 34.3 bits (75), Expect = 2.9
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 128 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHVMELH-FFLFAFIYI 295
IIQI+TGL L YY AF +I V +G +IR +H + L FI++
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHM 174
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 461 IADNRFVITVAPQKDI*PQGKT 396
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 121 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC 255
+ N N +W + + LH ++ N F +LP+CKL L +S TC
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTC 51
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 394 YVLP*GQISFWGATVITNLLSAIPYLG 474
Y+LP Q+ FW TV TN+ A P LG
Sbjct: 173 YLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q4N6L0 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 487
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 339 MINWNYNFIYTNSNCFHRLCLTLRS-NIFLGGNRNYKSIICNPLFRNYISKLNLRGICVD 515
+IN N+N+ + +CF+ L + S N+F +++++ N F N NL+ + +D
Sbjct: 12 LINPNFNYNISRISCFNILRINYFSTNVFNDKTVDFQNLPFNEKFVN-----NLKSLGID 66
Query: 516 NATLTRFYT 542
N L ++YT
Sbjct: 67 NLKLFQYYT 75
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 224 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 81
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,090,008
Number of Sequences: 1657284
Number of extensions: 9999059
Number of successful extensions: 19598
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 18579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19506
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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