Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060858.seq
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 109 3e-25
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 63 4e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 49 5e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 38 0.001
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 37 0.003
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 36 0.005
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 31 0.11
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.35
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.61
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 28 1.1
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 26 4.3
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.3
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 25 9.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 109 bits (263), Expect = 3e-25
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 432
G+SAAVSKTA APIER KLL+Q Q + + RYKGI + F R E+G++S WRGN
Sbjct: 35 GVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGN 94
Query: 433 FANVIRYFPTQALNFAFKDKYKQVF 507
ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 95 TANVLRYFPTQALNFAFKDKFKKMF 119
Score = 31.5 bits (68), Expect = 0.11
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 590 SLCFVYPLDFARTRLA--AXVGKGDGQRE 670
SL FVY LD+ARTRLA A K G+R+
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQ 174
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G + A S V ++ + L S + ++++ G+VD + + + GL +RG
Sbjct: 140 GAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFG 199
Query: 436 ANVIRYFPTQALNFAFKDKYKQV 504
+V+ + L F D K V
Sbjct: 200 PSVVGIVVYRGLYFGMYDTLKPV 222
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 62.9 bits (146), Expect = 4e-11
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G++A VS+TAV+P+ER K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 28 GVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNG 80
Query: 436 ANVIRYFPTQALNFAFKDKYKQ 501
N +R FP A+ FA + KQ
Sbjct: 81 TNCLRAFPYGAVQFATFNMLKQ 102
Score = 33.5 bits (73), Expect = 0.028
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G + + +T P + + QV + YK I A I K +G+ F+RG
Sbjct: 234 GFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYS 290
Query: 436 ANVIRYFPTQALNF 477
+N+++ P ++ +
Sbjct: 291 SNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 49.2 bits (112), Expect = 5e-07
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = +1
Query: 232 VR*GLPGCGISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 411
V+ G+ G G + V+K+ VAP++R K+L Q H S + A R+ G+ A I GL
Sbjct: 18 VKSGIAG-GTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75
Query: 412 LSFWRGNFANVIRYFPTQALNFAFKDKYKQV 504
++G+ A + R FP + F ++ ++V
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRV 106
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +1
Query: 259 ISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 438
+S + T V P+ + LQ Q S A Y G +D F + K +G ++G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400
Query: 439 NVIRYFPTQALNFAFKDKYKQ 501
N+++ P+ A+++ + K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421
Score = 30.7 bits (66), Expect = 0.20
Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGN 432
G++ +V++ + P++ K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 236 GMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGV 291
Query: 433 FANVIRYFPTQALNFAFKDKYKQVFPAVLTRR 528
++ FP A + + K+ + +L R
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 361 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTRRRSFW 540
Y G D +I K +G +RG ++ P +AL FA D Y +++ V R+ S
Sbjct: 45 YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSP 104
Query: 541 AL 546
AL
Sbjct: 105 AL 106
Score = 31.5 bits (68), Expect = 0.11
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 GISAAVSKT-AVAPIERXKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429
G A ++T V P E K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 430 NFANVIRYFPTQALNFAFKDKYK 498
A + R+ A F K +
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIR 186
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 602 VYPLDFARTRLAAXVGKGD 658
+YPLD +TR+ VGK D
Sbjct: 26 LYPLDVVKTRMQLSVGKSD 44
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 35.9 bits (79), Expect = 0.005
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
G+S A++ + P++ K LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 212 GLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIR 270
Query: 436 ANVIRYFPTQALNFAFKDKYKQV 504
++ P A+++A + K++
Sbjct: 271 PRMVVAMPATAVSWAAYEAGKEI 293
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 31.5 bits (68), Expect = 0.11
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 244 LPGCGISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 423
L G GI+ ++ P E + L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 424 RGNFANVIRYFPTQALNF 477
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 337 KQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 504
+ ++A + YK + +I + GLL FW G + R + + F +K ++
Sbjct: 232 QSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.1 bits (62), Expect = 0.61
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +1
Query: 346 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFPAVLTR 525
A Y DAF +I K +GL +F+RG F ++ + F + +K +
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGK 283
Query: 526 RRSFWALL 549
+ +F +L
Sbjct: 284 KSNFHIVL 291
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWR 426
G + S VAP++ K Q Q + G + + I +G+ +R
Sbjct: 13 GAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYR 72
Query: 427 GNFANVIRYFPTQALNFAFKDKYKQVF 507
G ++ Y P+ ++ F +K K +F
Sbjct: 73 GVGPMMLGYLPSWSIYFVVYEKCKVLF 99
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/83 (22%), Positives = 35/83 (42%)
Frame = +1
Query: 256 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 435
GIS+ + + +AP + K+ +Q+ S + F +++G+ + WRGN
Sbjct: 24 GISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNV 72
Query: 436 ANVIRYFPTQALNFAFKDKYKQV 504
+ Y A F K K +
Sbjct: 73 VAELLYLVYGAAEFVAFSKLKHL 95
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 250 GCGISAAVSKTAVAPIERXKLLLQVQHVSKQIAA-DQRYKGIVDAFVRIPKEQGLLSFWR 426
G +S+ +S +A ++ V V K + YK D F+ I + G+ +R
Sbjct: 190 GLALSSTLSGV-IAGAGSKAIMFPVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 427 GNFANVIRYFP 459
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 26.2 bits (55), Expect = 4.3
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 253 CGISAAVSKTAV-APIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429
CG++A V + V P+E K Q+ +++ + + +GL F+RG
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKGS----------VINTISTLARSEGLKGFYRG 138
Query: 430 NFANVIRYFPT 462
+ V Y PT
Sbjct: 139 YWMGVAIYLPT 149
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 82 YEITPNLLFKNQELVFRDPPSACAATPTSTY 174
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 259 ISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 429
IS + V P+E ++ LQ+Q K + Y G D +I + GL +G
Sbjct: 121 ISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,323,173
Number of Sequences: 5004
Number of extensions: 43945
Number of successful extensions: 140
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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