Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060856.seq
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 167 6e-42
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 167 6e-42
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 163 1e-40
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 163 1e-40
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 146 2e-35
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 146 2e-35
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 30 1.3
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 30 1.3
AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine re... 29 2.3
Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical ... 29 4.0
AC024794-6|AAK68493.2| 425|Caenorhabditis elegans Hypothetical ... 29 4.0
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 167 bits (406), Expect = 6e-42
Identities = 71/120 (59%), Positives = 89/120 (74%)
Frame = +1
Query: 310 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 489
Y ++VWRN+ LF LH+AA G Y +FHAKWQT +F++ LYV SG GITAGAHRLW+H
Sbjct: 42 YKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSH 101
Query: 490 KSYKAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
KSYKA + L A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWL
Sbjct: 102 KSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWL 161
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 167 bits (406), Expect = 6e-42
Identities = 71/120 (59%), Positives = 89/120 (74%)
Frame = +1
Query: 310 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 489
Y ++VWRN+ LF LH+AA G Y +FHAKWQT +F++ LYV SG GITAGAHRLW+H
Sbjct: 42 YKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSH 101
Query: 490 KSYKAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
KSYKA + L A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWL
Sbjct: 102 KSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWL 161
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 163 bits (396), Expect = 1e-40
Identities = 69/120 (57%), Positives = 86/120 (71%)
Frame = +1
Query: 310 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 489
Y ++VWRN+ LF LH AA G Y +F AKWQT +F ++LYV G GITAGAHRLW+H
Sbjct: 43 YKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSH 102
Query: 490 KSYKAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
KSYKA + L A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWL
Sbjct: 103 KSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWL 162
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 163 bits (396), Expect = 1e-40
Identities = 69/120 (57%), Positives = 86/120 (71%)
Frame = +1
Query: 310 YPKKLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAH 489
Y ++VWRN+ LF LH AA G Y +F AKWQT +F ++LYV G GITAGAHRLW+H
Sbjct: 43 YKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSH 102
Query: 490 KSYKAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
KSYKA + L A Q+ ++WARDHR HHK+++TDADPHN TRGFFF+H+GWL
Sbjct: 103 KSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWL 162
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 146 bits (353), Expect = 2e-35
Identities = 59/117 (50%), Positives = 83/117 (70%)
Frame = +1
Query: 319 KLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSY 498
++VW+N+ LF LHI AL G Y +F AKW T + ++L+ + +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 499 KAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
KA + + L AFQ+ +DWARDHR HHK+++TDADPH+ RG FF+H+GWL
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 146 bits (353), Expect = 2e-35
Identities = 59/117 (50%), Positives = 83/117 (70%)
Frame = +1
Query: 319 KLVWRNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSY 498
++VW+N+ LF LHI AL G Y +F AKW T + ++L+ + +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 499 KAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
KA + + L AFQ+ +DWARDHR HHK+++TDADPH+ RG FF+H+GWL
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -2
Query: 565 KQNPEKPKEL-KMIR--ITRRGTLLCMIYVPIIYVHLL*CQVLTL-HTIYRQI 419
K+ EK KE+ ++ I RR + L Y+P+ Y H++ C+ TL T+Y ++
Sbjct: 424 KKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKL 476
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -2
Query: 565 KQNPEKPKEL-KMIR--ITRRGTLLCMIYVPIIYVHLL*CQVLTL-HTIYRQI 419
K+ EK KE+ ++ I RR + L Y+P+ Y H++ C+ TL T+Y ++
Sbjct: 424 KKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKL 476
>AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine
receptor, class r protein6 protein.
Length = 410
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = -2
Query: 508 TLLCMIYVPIIYVHLL*CQVLTLHTIYRQIGLFAISHEIR 389
T++ +Y+ +++++LL C ++ + IY + ++S EIR
Sbjct: 187 TVIAPLYIAMVFINLLSCFIVAICLIYYFLVNLSLSREIR 226
>Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical
protein R10E4.9 protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +1
Query: 328 WRNIILFTY-LHIAALYG-GYLFLFHAKWQTDLFAY 429
++N+ILF Y L + L+G G+L++FHA++ T F Y
Sbjct: 4 FKNMILFIYTLVLFILHGYGFLYIFHAEY-TSEFKY 38
>Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical
protein R11H6.3 protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 346 KVLYSS--KLVSLGSCRLAVQVCWTVLSLEYQHIFKENT 236
K++YSS L SLG+ L + W V+ L + H+F T
Sbjct: 4 KMIYSSMFSLRSLGNSFLKTEPRWLVIFLSHSHLFDATT 42
>AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical
protein B0273.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 547 PKELKMIRITRRGTLLCMIYVPIIYVHLL*CQVL 446
P +K + TR G L+C + P +Y+H C+ L
Sbjct: 291 PMHVKQMSETRIGDLICRLGQPYVYIHQGVCEHL 324
>AC024794-6|AAK68493.2| 425|Caenorhabditis elegans Hypothetical
protein Y48G1BM.1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 547 PKELKMIRITRRGTLLCMIYVPIIYVHLL*CQVL 446
P +K + TR G L+C + P +Y+H C+ L
Sbjct: 291 PMHVKQMSETRIGDLICRLGQPYVYIHQGVCEHL 324
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical protein
B0244.6 protein.
Length = 982
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 390 EKVASIQRSNMKVCKKYYIPPN*FLW 313
EKV S + +K+CKKYY LW
Sbjct: 932 EKVLSETKKQLKMCKKYYAKVLETLW 957
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,258,862
Number of Sequences: 27780
Number of extensions: 368966
Number of successful extensions: 895
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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