Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060856.seq
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 86 2e-17
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 83 2e-16
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 81 5e-16
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 80 2e-15
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 79 4e-15
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 77 1e-14
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 76 2e-14
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 75 4e-14
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 73 2e-13
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 30 1.6
At4g14980.1 68417.m02302 DC1 domain-containing protein contains ... 27 8.6
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 27 8.6
At1g01650.1 68414.m00083 protease-associated (PA) domain-contain... 27 8.6
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 86.2 bits (204), Expect = 2e-17
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = +1
Query: 394 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALDW 573
F+ KW+ F ++LY ++ L IT HR AH+S+K L+ +A Q LDW
Sbjct: 51 FNYKWEALRFGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDW 110
Query: 574 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 111 VSIHRFHHQFTDSDRDPHSPIEGFWFSHVWWI 142
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/105 (37%), Positives = 57/105 (54%)
Frame = +1
Query: 355 LHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSS 534
+H AL + F + A W T LF Y + GLGIT HR AH+S+K L+
Sbjct: 50 VHSLALLAPFYFTWSALWVTFLF----YTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAY 105
Query: 535 SIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
A Q +DW HR HH++++++ DPH+ GF+FSH+ W+
Sbjct: 106 CALLAIQGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWI 150
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 81.4 bits (192), Expect = 5e-16
Identities = 34/92 (36%), Positives = 52/92 (56%)
Frame = +1
Query: 394 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALDW 573
F+ KW+ F IL +++ L IT HR HKS+K + S +A Q +DW
Sbjct: 51 FNYKWEALRFGVILAIVTSLSITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDW 110
Query: 574 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 111 VSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWI 142
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Frame = +1
Query: 364 AALYGGYLFL---FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSS 534
A+L+ +L L F+ W A I+Y + GLGIT HR AH+S+K +
Sbjct: 44 ASLFVHFLCLLAPFNFTWPALRVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAY 103
Query: 535 SIPWAFQDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
A Q +DW HR HH+++++D DPH+ GF+FSH+ WL
Sbjct: 104 CGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWL 148
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/92 (36%), Positives = 51/92 (55%)
Frame = +1
Query: 394 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALDW 573
F+ KW+ F IL +++ L IT HR H+S+K + S A Q LDW
Sbjct: 51 FNYKWEAFRFGIILAILTNLCITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDW 110
Query: 574 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 111 VSIHRFHHQFTDSDRDPHSPIEGFWFSHVLWI 142
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = +1
Query: 394 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALDW 573
F+ KW+ F +L+ ++ L IT HR +H+S+K + S +A Q +DW
Sbjct: 52 FNFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIPKWLEYPWAYSAVFALQGDPMDW 111
Query: 574 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
HR HH+++++D DPH+ G FSHI W+
Sbjct: 112 VSIHRFHHQFTDSDRDPHSPKEGLLFSHILWI 143
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 75.8 bits (178), Expect = 2e-14
Identities = 31/92 (33%), Positives = 51/92 (55%)
Frame = +1
Query: 394 FHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALDW 573
F+ W+ FA ++ + + L IT HR H+S+K + S +A Q +DW
Sbjct: 51 FNYTWEAFRFAAMVGISTNLSITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDW 110
Query: 574 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 111 VSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWI 142
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 394 FHAKWQTDLFAYILYVMSGL-GITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALD 570
F W+ A+ LY+++GL GIT HR +HK++K + A Q + +D
Sbjct: 121 FQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPID 180
Query: 571 WARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
W HR HH++ ++D DPH+ GF+FSH+ W+
Sbjct: 181 WVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWM 213
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 376 GGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHRLWAHKSYKA-KCLYVLSLSSSIPWAF 552
G L A W +F +++++ +G+ IT HR +H+S+ K L L + AF
Sbjct: 43 GSILLQLEAFW---VFPWLVFI-NGICITLSYHRNLSHRSFDLPKWLEYLFAYGGV-LAF 97
Query: 553 QDSALDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 669
Q ++W +HR HHK+ ET DPH+ T+GF+FSH+ W+
Sbjct: 98 QGDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSHMAWI 136
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 442 MSGLGITAGAHRLWAHKSYKAKCLYVLSLSSSIPWAFQDSALDWARDHRMHHKYSETDAD 621
++ LG G HRLWA++ + + S+S + W +Q+ + D ++ T+ D
Sbjct: 419 LARLGYIQG-HRLWAYEKLSS---VISSVSPPLGWMYQERSFYCEGDKKLEDLEKATELD 474
Query: 622 P 624
P
Sbjct: 475 P 475
>At4g14980.1 68417.m02302 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 470
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 287 VLDSPKSGVSAHFQREHHLHPLHW 216
V D S VS FQ + H HPL+W
Sbjct: 291 VYDVRCSSVSEPFQHDLHPHPLYW 314
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 586 DDHVPNLKQNPEKPKELKMIRITRR 512
DDHV +KQ EK + K++R R
Sbjct: 631 DDHVEEMKQEVEKVRSAKLVRKLER 655
>At1g01650.1 68414.m00083 protease-associated (PA) domain-containing
protein contains protease associated (PA) domain,
Pfam:PF02225
Length = 491
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 361 IAALYGGYLFLFHAKWQTDLFAYILYVMSGLGIT 462
I+A++GG+LF HA L AY++ V G+G T
Sbjct: 260 ISAIFGGFLFPDHA-----LQAYVILVYRGVGGT 288
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,938,365
Number of Sequences: 28952
Number of extensions: 323921
Number of successful extensions: 815
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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