Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060852.seq
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 25 0.58
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 7.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 7.1
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 9.4
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.4
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 21 9.4
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 9.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.4
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 9.4
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 9.4
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 9.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 9.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.4
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 25.0 bits (52), Expect = 0.58
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 150 AVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 34
A ILT+TSP + +S S + TAA HL P
Sbjct: 148 APILTKTSPTPVSINNNTSTSSSASSPSVTAAPHLRDSP 186
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 148 RDLNAHFTGFWRVHFNLLD 92
R +NAH +G V NLLD
Sbjct: 55 RYMNAHLSGIQLVVRNLLD 73
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 397 PDGTRRFRCKGQELYH 444
PDGT + GQ++ H
Sbjct: 417 PDGTMGYMMDGQQMMH 432
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 93 SRRLKWTRQKPVKCALRSRPPESAIL 170
S R W R +PV L +R + A L
Sbjct: 70 SNRPWWERYQPVSYILNTRSGDEAAL 95
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 93 SRRLKWTRQKPVKCALRSRPPESAIL 170
S R W R +PV L +R + A L
Sbjct: 71 SNRPWWERYQPVSYILNTRSGDEAAL 96
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 305 TSHSATHVNSA*IRKLICARRF 370
T+H TH R +C RRF
Sbjct: 38 TAHVRTHSGEKPFRCPVCDRRF 59
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 305 TSHSATHVNSA*IRKLICARRF 370
T+H TH R +C RRF
Sbjct: 294 TAHVRTHSGEKPFRCPVCDRRF 315
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSS 175
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SISSMDSGLPASHATAAKHLITL 37
++S++ G H TA H+IT+
Sbjct: 146 TLSALLEGFTLYHTTAYLHIITM 168
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SISSMDSGLPASHATAAKHLITL 37
++S++ G H TA H+IT+
Sbjct: 146 TLSALLEGFTLYHTTAYLHIITM 168
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SISSMDSGLPASHATAAKHLITL 37
++S++ G H TA H+IT+
Sbjct: 146 TLSALLEGFTLYHTTAYLHIITM 168
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 81 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 131
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 210 NTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATA 58
+TP S P + A+ + + TSP +TS +S + PAS ++
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSS 175
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,357
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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