Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060852.seq
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 121 6e-28
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 116 1e-26
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 115 4e-26
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 109 2e-24
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 79 3e-15
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 78 7e-15
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 78 7e-15
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 76 2e-14
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 66 2e-11
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 63 2e-10
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 56 2e-08
03_01_0012 - 101584-101898,102274-102531,102932-103474 45 6e-05
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 43 3e-04
09_04_0028 - 13928542-13929538,13929736-13929818 42 6e-04
09_04_0029 - 13932414-13933416,13933821-13933903 40 0.001
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 40 0.002
09_04_0030 + 13940168-13940250,13940703-13941714 40 0.002
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 40 0.002
09_04_0031 + 13946692-13946774,13947007-13948012 39 0.003
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 39 0.003
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 38 0.010
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 36 0.040
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 35 0.052
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 35 0.069
02_01_0501 + 3655345-3655722 35 0.069
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 33 0.21
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 33 0.28
06_03_1081 - 27447128-27447550 31 1.1
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 31 1.1
01_06_1309 - 36170947-36171077,36171227-36172198,36172285-361724... 29 2.6
04_03_0375 - 15085537-15085827,15086742-15087101,15087127-15087684 28 6.0
03_06_0678 - 35480711-35484658 28 6.0
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 6.0
08_02_0538 - 18321101-18321128,18321767-18322587 28 7.9
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 121 bits (291), Expect = 6e-28
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = +2
Query: 26 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 205
ST G+VI C AAVAWEA +P++IE+++V PP+AGEVRVKI T +CHTD YT SGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 206 VFPVVLGHEGGGIVESAVRESLQSSPG 286
+FP +LGHE GIVES + PG
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPG 90
Score = 104 bits (250), Expect = 6e-23
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGV-MPDGTRRFRCKGQELY 441
VT V+PGDHV+P Y +C CKFC + KTNLC KVR+ G GV M D RF G+ +Y
Sbjct: 84 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIY 143
Query: 442 HFMGCSTFSQYTVVLEISLCKV 507
HFMG STFSQYTVV ++S+ K+
Sbjct: 144 HFMGTSTFSQYTVVHDVSVAKI 165
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/56 (57%), Positives = 34/56 (60%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APLDKVCLLGCGV TG GA NTAKVE GS AIF K+ A+RI
Sbjct: 169 APLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRI 224
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 116 bits (280), Expect = 1e-26
Identities = 56/88 (63%), Positives = 63/88 (71%)
Frame = +2
Query: 23 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 202
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQT 60
Query: 203 GVFPVVLGHEGGGIVESAVRESLQSSPG 286
VFP +LGHE GGIVES + +PG
Sbjct: 61 PVFPRILGHEAGGIVESVGEGVTELAPG 88
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELY 441
VT + PGDHV+P++ +C C C + ++N+C +R +GVM DG RF KG+ ++
Sbjct: 82 VTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIF 141
Query: 442 HFMGCSTFSQYTVVLEISLCKV 507
HF+G STFS+YTV+ L K+
Sbjct: 142 HFVGTSTFSEYTVIHVGCLAKI 163
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APLDKVC+L CG TG+GA +N AK + G AIF + A+RI
Sbjct: 167 APLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRI 222
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 115 bits (276), Expect = 4e-26
Identities = 55/88 (62%), Positives = 62/88 (70%)
Frame = +2
Query: 23 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 202
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVR+KI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWEAKGQT 60
Query: 203 GVFPVVLGHEGGGIVESAVRESLQSSPG 286
VFP + GHE GGIVES + SPG
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTELSPG 88
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCK-GQEL 438
VT + PGDHV+P++ +C C+ CL+ ++NLC +R +G M DG RF + GQ +
Sbjct: 82 VTELSPGDHVLPVFTGECGDCRHCLSEESNLCDLLRINTDRGAMIGDGQTRFTARGGQPV 141
Query: 439 YHFMGCSTFSQYTVV 483
YHF+G STFS+YTVV
Sbjct: 142 YHFLGTSTFSEYTVV 156
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +3
Query: 513 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
AAPLDKVC+L CG+ TG+GA +N AK G AIF + A+RI
Sbjct: 167 AAPLDKVCVLSCGISTGFGATVNVAKPPKGCTVAIFGLGAVGLAAMEGARISGASRI 223
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 109 bits (262), Expect = 2e-24
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +2
Query: 23 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 202
M+T GKVIKC AAVAWEA KPL IEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 60
Query: 203 GVFPVVLGHEGGGIVESAVRESLQSSPG 286
VFP + GHE GGIVES +PG
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTDLAPG 88
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELY 441
VT + PGDHV+P++ +C C C + ++N+C +R +GVM DG RF G+ +Y
Sbjct: 82 VTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIY 141
Query: 442 HFMGCSTFSQYTVV 483
HF+G STFS+YTV+
Sbjct: 142 HFVGTSTFSEYTVM 155
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +3
Query: 513 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
AAPLDKVC+L CG+ TG GA +N AK GS AIF + A+RI
Sbjct: 166 AAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRI 222
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/72 (54%), Positives = 47/72 (65%)
Frame = +2
Query: 38 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPV 217
K I+C AAV A +PL +EEI VDPPKA E+R+KI T +CHTD DP FP
Sbjct: 7 KPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICTSLCHTDVTLWHKVDP--AFPR 64
Query: 218 VLGHEGGGIVES 253
+LGHE G+VES
Sbjct: 65 ILGHEAYGVVES 76
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRF-RCKGQELY 441
V + GD VVP ++ QC++C C TN C V T G G+ DGT RF +G+ L
Sbjct: 81 VEGLAAGDTVVPTFMGQCDSCASCAAEWTNQCTAVPFTMGPGMRRDGTTRFWDGEGKPLS 140
Query: 442 HFMGCSTFSQYTVVLEISLCKVE 510
+ ++FSQYTVV + KV+
Sbjct: 141 DTVAVTSFSQYTVVDVNQVVKVD 163
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 77.8 bits (183), Expect = 7e-15
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +2
Query: 11 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 190
+ A T GK IKC AAVA G+ L +EE+EV PP EVR+K+ T +CHTD G
Sbjct: 14 NGAGADTKGKPIKCKAAVAHGPGEALVMEEVEVAPPARMEVRLKVLFTSICHTDLSAWKG 73
Query: 191 KDP-EGVFPVVLGHEGGGIVESAVRESLQSSPG 286
++ + FP +LGHE G+VES +PG
Sbjct: 74 ENELQRKFPRILGHEAAGVVESVGEGVEDLAPG 106
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRF----RCKG 429
V + PGDHVVP++ +C C +C + K+NLC+ R + M DG RF R G
Sbjct: 100 VEDLAPGDHVVPIFTGECGACTYCESSKSNLCKTYRVNPFKSTMVTDGGTRFTMIDRSSG 159
Query: 430 --QELYHFMGCSTFSQYTVV 483
+YHF+ STF++YTV+
Sbjct: 160 ARNPVYHFLNTSTFAEYTVI 179
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/56 (46%), Positives = 30/56 (53%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APL+K+ LL CGV TG GAA NTA V GS AIF + A+RI
Sbjct: 191 APLEKMSLLSCGVSTGVGAAWNTANVSKGSTVAIFGLGAIGLAVAEGARLRGASRI 246
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 77.8 bits (183), Expect = 7e-15
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +2
Query: 44 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 223
I+C AAV AG+PL++EEI VDPPKA EVR+KI T +CH+D +D GVFP +
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQDFPGVFPRIF 68
Query: 224 GHEGGG 241
GHE G
Sbjct: 69 GHEAFG 74
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = +2
Query: 17 AVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKD 196
A S+ I C AAVAW G+ L +EE+EV PP+A E+RVK+ +T +C +D
Sbjct: 615 AAASSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVSTSICRSDVTQWQSTA 674
Query: 197 PEGVFPVVLGHEGGGIVES 253
+FP + GHE G+VES
Sbjct: 675 QTDLFPRIFGHEASGVVES 693
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELY 441
VT + GDHV+ +++ +C +CK C++ K+N+CQK+ + +GVM D RF +G+ +Y
Sbjct: 698 VTEFEVGDHVLTVFIGECMSCKHCVSGKSNMCQKL-GLERRGVMHSDQKTRFSLRGKPVY 756
Query: 442 HFMGCSTFSQYTVV 483
H+ S+FS+YTVV
Sbjct: 757 HYCAVSSFSEYTVV 770
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 519 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 620
P+D++CLL CGV G GAA A + GS+ IF
Sbjct: 783 PMDRICLLSCGVSAGLGAAWKVADISKGSSVVIF 816
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 283 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCK-GQELYHFMGCS 459
GD VVP ++ QC C C + ++N+C R G+ DGT RFR + G ++HF+G S
Sbjct: 31 GDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFRDRHGAPIHHFLGVS 90
Query: 460 TFSQYTVV 483
+FS+YTVV
Sbjct: 91 SFSEYTVV 98
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/36 (58%), Positives = 22/36 (61%)
Frame = +3
Query: 513 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 620
A P LL CG TG GAA AKVEPGS+ AIF
Sbjct: 109 AVPPATASLLSCGATTGVGAAWKLAKVEPGSSVAIF 144
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +2
Query: 59 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGG 238
AV WE G+PL++E+ + PKAGE+ +K A GVCH+D + L G+ P P V+GHE
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELPFS-SPCVVGHEIT 111
Query: 239 GIV 247
G V
Sbjct: 112 GEV 114
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 283 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDG-TRRF-RCKGQELYHFMG 453
G HVV ++ C C +C+ + +LC+ + + +G + DG TR F R G+ +Y +
Sbjct: 132 GSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYDGQTRLFLRSNGKPVYMY-S 190
Query: 454 CSTFSQYTVV 483
++Y VV
Sbjct: 191 MGGLAEYCVV 200
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 519 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
P + +LGC V T YGA + A++ G + A+ KA A+ +
Sbjct: 213 PYTESAILGCAVFTAYGALRHAAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEV 267
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +1
Query: 292 VVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP-DGTRRFR--CKGQELYHFMGCST 462
VVP++ QC+ C CL+ ++NLC K+ + G+MP D T RF G+ + HF+ S+
Sbjct: 2 VVPVFAAQCSECPDCLSDRSNLCSKLPNV--AGLMPRDRTTRFSSVSTGEPIRHFLSVSS 59
Query: 463 FSQYTVV 483
F++YTVV
Sbjct: 60 FAEYTVV 66
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 519 PLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 620
P CLL CG+ TG GAA A VEPGS+ A+F
Sbjct: 79 PPAMACLLSCGISTGVGAAWKVAAVEPGSSVAVF 112
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +2
Query: 41 VIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVV 220
V+KC+ + L E++EV PK GE+R+K TA GV D Y G P V
Sbjct: 46 VVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGV-YSAPLPFV 104
Query: 221 LGHEGGGIV 247
G E G+V
Sbjct: 105 PGREAVGVV 113
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 101 IEVDPPKAGE--VRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIV 247
I + K G+ V +K+ G+CH+D +T+ + V+PVV GHE G+V
Sbjct: 38 IRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVV 88
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIV 247
+V +K+ G+CHTD +T+ + ++PVV GHE G+V
Sbjct: 34 DVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVV 73
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 56 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 226
AAV W A LS K +V +K+ G+CHTD + + ++PVV G
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPG 66
Query: 227 HEGGGIV 247
HE G+V
Sbjct: 67 HEIVGVV 73
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 86 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFP-VVLGHEGGGIVESA 256
L+ EE+E+ P GE+R+K A GV + D Y +G ++P P +V G I
Sbjct: 30 LTWEEVEIGEPSEGEIRIKNKAIGVNYVDIYYRTGLHQEPLPFVPDLVYGDSDNKIPTYF 89
Query: 257 VRESLQSSPGTT*YL 301
V+ ++ S PG +L
Sbjct: 90 VKSNVSSWPGENSWL 104
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 56 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLG 226
AAV W A LS K +V +K+ G+CHTD + + ++PVV G
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPG 66
Query: 227 HEGGGIV 247
HE G+V
Sbjct: 67 HEIVGVV 73
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 14 SAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK 193
+A + G+ + + A ++ LS I +V +KI G+CH+D + + +
Sbjct: 4 TAASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNE 63
Query: 194 DPEGVFPVVLGHEGGGIV 247
++P+V GHE G+V
Sbjct: 64 WKHSIYPLVPGHEIAGVV 81
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIV 247
+V +K+ G+CHTD + + + ++PVV GHE G+V
Sbjct: 34 DVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVV 73
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIVESA 256
+V +KI G+CH+D +++ + +P+V GHE G+V A
Sbjct: 32 DVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEA 74
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIVESAVRESLQSSPGTT 292
+V VKI G+CH+D T+ + +PVV GHE G+V + + G T
Sbjct: 34 DVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDT 88
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 65 AWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEG 235
AW A P LS + ++ +V ++IT GVC+ D + ++P+V GHE
Sbjct: 12 AWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEI 71
Query: 236 GGIV 247
G+V
Sbjct: 72 AGVV 75
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIV 247
+V +K+ G+CHTD + + ++PVV GHE G+V
Sbjct: 37 DVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVV 76
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 34.7 bits (76), Expect = 0.069
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 65 AWEAGK-PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF---PVVLGHE 232
AW K L I ++ P +VRV++ A G+C +D + L P+V+GHE
Sbjct: 26 AWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHE 85
Query: 233 GGGIVE 250
G++E
Sbjct: 86 CAGVIE 91
>02_01_0501 + 3655345-3655722
Length = 125
Score = 34.7 bits (76), Expect = 0.069
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 173 AYTLSGKDPEGVFPVVLGHEGGGIVESAVRESLQSSP 283
A GK P+G PV +G EGG + AVR L SP
Sbjct: 33 AAAAGGKVPQGHVPVCVGEEGGPVERFAVRAELLGSP 69
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIVESAVRESLQSSPG 286
+V VK+ G+CHTD + +P+V GHE G V E + S G
Sbjct: 36 DVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAG 88
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 65 AWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEG 235
AW A P LS + ++ +V ++IT GVC+ D ++P+V GHE
Sbjct: 12 AWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEI 71
Query: 236 GGIV 247
G+V
Sbjct: 72 AGVV 75
>06_03_1081 - 27447128-27447550
Length = 140
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 197 PEGVFPVVLGHEGGGIVESAVRESLQSSP 283
PEG PV +G EGG + AVR L P
Sbjct: 54 PEGHVPVCVGEEGGPVERYAVRTDLLGQP 82
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 56 AAVAWEAGKPLSIEEIEVD----PPKAGEVRVKITATGVCHTDAYTLSGKDP 199
A V AG P +EE +V PP GEV V ++A GV D G+ P
Sbjct: 3 AVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYP 54
>01_06_1309 -
36170947-36171077,36171227-36172198,36172285-36172413,
36172535-36172779,36172904-36173055,36173202-36173306
Length = 577
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 311 GTYRGTTWSPGLTEVTPSPHSPRFRRLHVPVLQETLPQ 198
GT+ TT + L PS HS ++PVL+ TLPQ
Sbjct: 299 GTFDNTTVAGILEYEDPSSHSTAAFNKNLPVLRPTLPQ 336
>04_03_0375 - 15085537-15085827,15086742-15087101,15087127-15087684
Length = 402
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 117 GGSTSISSMDSGLPASHATAAKHLITLPTVDMTALDLV 4
GG S+ +GLP S A AA +P VD T ++V
Sbjct: 129 GGDASVLGGGAGLPGSGALAAGVRAVVPDVDATGGEVV 166
>03_06_0678 - 35480711-35484658
Length = 1315
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 335 QNLHVLHCGTYRGTTWSPGLTEVTPSPHSPRFRRLHV 225
+ LH+L C G T + G + + PS PR L +
Sbjct: 1064 RKLHILQCKNLTGLTQARGQSTLAPSELLPRLESLQI 1100
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 377 VERTFWHKLVFGFKQNLHVLHCGTYRGT 294
V + WH+LV G L ++ G+ RGT
Sbjct: 1112 VPSSIWHRLVAGLNAQLRLVRRGSLRGT 1139
>08_02_0538 - 18321101-18321128,18321767-18322587
Length = 282
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 198 GSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDS 85
G F + SV Q P+ ILT+ +P+ + S SS+D+
Sbjct: 222 GQFDYAALVSVSQRPIRDILTKIAPSVIPTDSSSSLDT 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,531,873
Number of Sequences: 37544
Number of extensions: 431879
Number of successful extensions: 1240
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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