Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060852.seq
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_55751| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 31 0.87
SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 30 1.5
SB_2653| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 4.6
SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1) 28 6.1
SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19) 28 8.1
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 123 bits (297), Expect = 1e-28
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +2
Query: 44 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 223
I C AAVAWE KPLSIE IEV PPKA EVR+KI ATGVCHTDAYTLSG DPEG+FP +L
Sbjct: 2 ITCQAAVAWEPKKPLSIETIEVAPPKAHEVRIKILATGVCHTDAYTLSGVDPEGLFPCIL 61
Query: 224 GHEGGGIVES 253
GHEGGGIVES
Sbjct: 62 GHEGGGIVES 71
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 34.3 bits (75), Expect = 0.093
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 128 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIV 247
EV VK+ +G+C D L G+ P VVLGHE G+V
Sbjct: 75 EVIVKVAYSGICDRDLQILEGELPAAKC-VVLGHEFSGVV 113
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG 405
V +V GD VV CNTCK C + + C+K + GV +G
Sbjct: 120 VKNVSIGDRVVVNPNSSCNTCKACRRGQPHFCEKGGTGSAIGVWKNG 166
>SB_55751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 204 PSGSFPESVYASVWQTPVA-VILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLPTV 28
PS +P Y TP+A +T T+PA +T+I++ + TAA +ITL T+
Sbjct: 16 PSLPYPHHPYYHHCLTPMAPTTITATTPATIAATTITTFPTATNPP-ITAANRMITLLTI 74
Query: 27 DMTALDLV 4
T D++
Sbjct: 75 AATTADII 82
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKV 369
V+ +K GD V C TC +C + NLC K+
Sbjct: 70 VSDLKEGDRVAIEPGTPCRTCSYCKKGRYNLCAKM 104
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 107 VDPPKAGEVRVKITATGVCHTDA-YTLSGKDPEGVF--PVVLGHEGGGIV 247
+D + +V++ + G+C +D Y G + V P+VLGHE G++
Sbjct: 14 IDDLRLVQVQISMHTVGICGSDVHYWKHGCIGDFVLTAPMVLGHESSGVI 63
>SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 65 AWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTL 184
AW G L ++ V P A + +IT TG T AYTL
Sbjct: 361 AWSFGLKLGLKSQNVGPGPAYLIPARITRTGTDGTPAYTL 400
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG 405
V V GD VV + C C FCL + +LC+ G+ +G
Sbjct: 72 VQHVSVGDRVVINPLTSCGICDFCLKGQPHLCKVEGKNTAIGIKRNG 118
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 86 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF-PVVLGHEGGGIVESAVR 262
+ +E+ P G+V VK+ A GV D G P P V G E G+VE
Sbjct: 53 IKVEKYARPKPMQGQVVVKVHACGVTFADLLQRQGHFPLAPKPPYVCGFECSGVVEELGE 112
Query: 263 E 265
E
Sbjct: 113 E 113
>SB_2653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1298
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2
Query: 446 KW*SSCPLQRNRLVPSGITP*P*VERTFWHKLVFGFKQNLHVLHCGTYRGTTWSPGLTEV 267
+W + + LV I P P + L FG+ NL+ GTY TW P + V
Sbjct: 1070 RWLDKGTISASELVAGCILPLPYLSYRLLRHL-FGYSHNLN----GTYTDATWKPSVERV 1124
Query: 266 TPSP 255
P
Sbjct: 1125 LYGP 1128
>SB_37040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 30 QSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIH 182
QS L+ P +RG Q + R KW + P KC ++ + E A++ R+H
Sbjct: 3 QSGNALTPLPHTRGIQTNTLLLR--KWAVEAPSKCRMKGQTKE-AVVQRVH 50
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 27 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPV-KCALRSRPPESAILTRIHSPE 191
Q S K ++ PQ + KQASR LK KP + SRP ++++ T+ P+
Sbjct: 52 QASRKTKTSKPQDQDKQASRPRQASLKTKTSKPQDQDKQASRPRQASLKTKTSKPQ 107
>SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)
Length = 208
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = -1
Query: 483 NNCVLTEC*TTHEMVEFLSFTAES----PSAIWHHTLTLSRTNLLAQISFRIQAEFTCVA 316
+ CV + T HE V F S T S H +T L ++FR CV
Sbjct: 52 HECVTSRSITLHECVTFRSITLHERMTFRSITLHECVTFRSITLHECVTFRSITLHECVT 111
Query: 315 LWDV 304
W +
Sbjct: 112 FWSI 115
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = -1
Query: 483 NNCVLTEC*TTHEMVEFLSFTAES----PSAIWHHTLTLSRTNLLAQISFRIQAEFTCVA 316
+ CV T HE V F S T S H +T L +++FR CV
Sbjct: 107 HECVTFWSITLHECVTFWSITLHECVTFRSITLHECVTFRNITLHERVTFRSITLHECVT 166
Query: 315 LWDV 304
W +
Sbjct: 167 FWSI 170
>SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19)
Length = 648
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 311 GTYRGTTWSPGLTEVTPSPHSPRFRRLHVPVLQETLPQDL 192
G+Y L E P P RFRR LQE L Q +
Sbjct: 112 GSYEALILLYKLRETDPCPWDVRFRRFRAKELQELLRQQI 151
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 9 GPVQSCQQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIHSP 188
GP +S + +K +P+ R + +S S L K K R E+AIL R HSP
Sbjct: 990 GP-ESIKMRIKGSRKFPKMRRQLSSTTTSAEL--IEHKQSKTTPSGRKLETAILRRAHSP 1046
Query: 189 EKI 197
+ +
Sbjct: 1047 QTV 1049
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,821,851
Number of Sequences: 59808
Number of extensions: 481388
Number of successful extensions: 1155
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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