Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060852.seq
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 143 1e-34
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 142 2e-34
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 142 2e-34
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 142 2e-34
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.58
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.1
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 28 5.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 9.4
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 143 bits (346), Expect = 1e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 444
VT PGDHVVPLYVPQC C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+H
Sbjct: 256 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFH 315
Query: 445 FMGCSTFSQYTVVLEISLCKV 507
FMGCSTFS+YTVV +ISLCKV
Sbjct: 316 FMGCSTFSEYTVVADISLCKV 336
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = +2
Query: 143 ITATGVCHTDAYTLSGKDPEGVFPVVLGHEGGGIVESAVRESLQSSPG 286
I T VCHTDAYTL G DPEG+FPVVLGHEG GIVES + +PG
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPG 262
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APL+KV LLGCG+ TGYGA LNT KVE GS A++ KA A +I
Sbjct: 340 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKI 395
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 45 LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALR 143
+ A P S G Q +R KW +KP K AL+
Sbjct: 181 IPARPPSPGAQKLHSRLKRSKWLHRKPTKFALK 213
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 142 bits (344), Expect = 2e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 444
VT PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+H
Sbjct: 83 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFH 142
Query: 445 FMGCSTFSQYTVVLEISLCKV 507
FMGCSTFS+YTVV +ISLCKV
Sbjct: 143 FMGCSTFSEYTVVADISLCKV 163
Score = 123 bits (297), Expect = 1e-28
Identities = 60/87 (68%), Positives = 64/87 (73%)
Frame = +2
Query: 26 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 205
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 206 VFPVVLGHEGGGIVESAVRESLQSSPG 286
+FPVVLGHEG GIVES +PG
Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPG 89
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APL+KV LLGCG+ TGYGA LNT KVE GS A++ KA A +I
Sbjct: 167 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKI 222
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 142 bits (344), Expect = 2e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 444
VT PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+H
Sbjct: 83 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFH 142
Query: 445 FMGCSTFSQYTVVLEISLCKV 507
FMGCSTFS+YTVV +ISLCKV
Sbjct: 143 FMGCSTFSEYTVVADISLCKV 163
Score = 123 bits (297), Expect = 1e-28
Identities = 60/87 (68%), Positives = 64/87 (73%)
Frame = +2
Query: 26 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 205
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 206 VFPVVLGHEGGGIVESAVRESLQSSPG 286
+FPVVLGHEG GIVES +PG
Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPG 89
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APL+KV LLGCG+ TGYGA LNT KVE GS A++ KA A +I
Sbjct: 167 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKI 222
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 142 bits (344), Expect = 2e-34
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 265 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 444
VT PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG G MPDG+ RF C G++L+H
Sbjct: 85 VTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFH 144
Query: 445 FMGCSTFSQYTVVLEISLCKV 507
FMGCSTFS+YTVV +ISLCKV
Sbjct: 145 FMGCSTFSEYTVVADISLCKV 165
Score = 118 bits (284), Expect = 4e-27
Identities = 60/89 (67%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Frame = +2
Query: 26 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 199
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62
Query: 200 EGVFPVVLGHEGGGIVESAVRESLQSSPG 286
EG+FPVVLGHEG GIVES +PG
Sbjct: 63 EGLFPVVLGHEGSGIVESVGEGVTGFAPG 91
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Frame = +3
Query: 516 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXCKAGSANRI 683
APL+KV LLGCG+ TGYGA LNT KVE GS A++ KA A +I
Sbjct: 169 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKI 224
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 77 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLGHEGGGIV 247
G PL + ++ V P+ E+ VKI +G+CH+D +T G + + P++ GHEG G V
Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTV 76
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 83 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLGHEGGGIV 247
PL + ++ V P E+ VKI +G+CH+D + G KD V P+V GHEG G V
Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGSV 75
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFP 214
V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G P
Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCP 65
Query: 215 VVLGHEGGGIVES 253
++ GHEG G V S
Sbjct: 66 MIGGHEGAGSVIS 78
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 86 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLGHEGGGIV 247
L +E+ + P +V VKI G+C +D + L+ G F P+VLGHE G+V
Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGHESSGVV 72
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 86 LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLGHEGGGIVESA 256
L +E++ + P +V VK+ G+C +D +T P V P+++GHE GIV
Sbjct: 16 LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEV 75
Query: 257 VRE 265
E
Sbjct: 76 GNE 78
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.082
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 56 AAVAWEAGKPLSIEEIEVDPPK--AGEVRVKITATGVCHTDAYTLSGKDPE-GVFPVVLG 226
AAV G P IE +E D P+ +V V+ A GV D Y +G+ + P V G
Sbjct: 12 AAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYVPG 71
Query: 227 HEGGGIVESAVRESLQS 277
+G G VE V ES+++
Sbjct: 72 KDGAGFVE-LVGESVKN 87
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 11 SSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLS 187
S+ V + G+++ CL AW+ + + EVD + I CH D + L+
Sbjct: 60 STVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKMLNTCHEDFWNLA 119
Query: 188 GKDPEGVFPVVLGHEGGGIVESAVRESLQSSPGTT 292
P+ + VVL E + E R + + TT
Sbjct: 120 ---PQNI-NVVLHREVSSVSEKYQRRGIATKMLTT 150
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 53 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 178
L A+ + + PL E I DP + +++T T VC DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 441 VEFLSFTAESPSAIWHHTLTL 379
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +2
Query: 95 EEIEVDPPKAGEVRVKITATGVCHTD---AYTLSGKDPEGVFPVVL--GHEGGGIVES 253
E I PPK RVK+ GVC TD + T + G+ L G+E GIVES
Sbjct: 25 EPIPDVPPKGA--RVKVCYAGVCLTDREVSNTKQARITNGIKDTSLFPGYEVSGIVES 80
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -1
Query: 213 GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 34
G++ G+ SV +S + T T+P+ STS SS +P+S A + P
Sbjct: 1533 GSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGP 1592
Query: 33 TVDMT 19
TV T
Sbjct: 1593 TVATT 1597
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,788,100
Number of Sequences: 27780
Number of extensions: 339653
Number of successful extensions: 962
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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