BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060851.seq (617 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC23C11.08 |php3||CCAAT-binding factor complex subunit Php3 |S... 60 3e-10 SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces p... 35 0.008 SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 32 0.076 SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 27 2.9 SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 26 3.8 SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 25 6.6 SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 25 6.6 SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 25 6.6 SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 25 6.6 SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 25 8.8 >SPAC23C11.08 |php3||CCAAT-binding factor complex subunit Php3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 116 Score = 60.1 bits (139), Expect = 3e-10 Identities = 31/51 (60%), Positives = 35/51 (68%) Frame = +2 Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616 K++K C C EFIS VT EAS++C EKRKTI GEDVL ALNT GF Sbjct: 33 KEAKDCVQDCVS---EFISFVTGEASEQCTQEKRKTITGEDVLLALNTLGF 80 Score = 54.8 bits (126), Expect = 9e-09 Identities = 22/33 (66%), Positives = 29/33 (87%) Frame = +3 Query: 411 LPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509 LPIAN+A+IMK A+PEN KI+K+A+ CVQ C+S Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVS 44 >SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces pombe|chr 2|||Manual Length = 161 Score = 35.1 bits (77), Expect = 0.008 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +2 Query: 506 IEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616 +EFI V+SEA++ C+ E +KTI E ++ AL F Sbjct: 44 VEFIHLVSSEANEICEKEAKKTIAAEHIIKALENLEF 80 >SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 568 Score = 31.9 bits (69), Expect = 0.076 Identities = 22/68 (32%), Positives = 30/68 (44%) Frame = +3 Query: 135 SSLNTQFCKHYVTLSSKSSTHFFNKRELLLKVDTKISNHGSDELGNDLVRLDNGFLVADD 314 S +N++ + YVT+ S S+H R V +N DE D + L N F A D Sbjct: 88 SHINSKTERGYVTVESDMSSHNTLDRNSKPTVSHSYTNSSKDEKFLDPIALQNLFSPASD 147 Query: 315 TFVVNSDD 338 T N D Sbjct: 148 THSQNIHD 155 >SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 348 Score = 26.6 bits (56), Expect = 2.9 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +3 Query: 291 NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQD 404 NG V D T VV S ED+ N ++ N P+ + Sbjct: 279 NGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEASE 316 >SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 652 Score = 26.2 bits (55), Expect = 3.8 Identities = 11/33 (33%), Positives = 13/33 (39%) Frame = -3 Query: 375 YSQSPSCFHLLTHHQN*QQMCHPLPKIHCPISL 277 Y P C TH N +P IH P+ L Sbjct: 127 YDPRPGCLKFTTHEINVSYTDTSIPVIHIPVQL 159 >SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 642 Score = 25.4 bits (53), Expect = 6.6 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 600 NANNTSSPLMVLRFSTLHLSLASLVTXDMNS 508 N+N+ SSP+ V R STL + A+ +M S Sbjct: 529 NSNSKSSPVAVQRVSTLPQASANKQAKEMES 559 >SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, zf-fungal binuclear cluster type |Schizosaccharomyces pombe|chr 1|||Manual Length = 977 Score = 25.4 bits (53), Expect = 6.6 Identities = 14/56 (25%), Positives = 26/56 (46%) Frame = -3 Query: 414 VKIYPVLLAVHCSYSQSPSCFHLLTHHQN*QQMCHPLPKIHCPISLSHFQVRRFHD 247 ++I+ + HC + QS + FH T ++ PL ++ ++S R HD Sbjct: 407 LRIHLAEVFFHCCHGQSYNLFHRPTFFESLNNNTVPLVVVYAVCAVSARFSSRMHD 462 >SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces pombe|chr 2|||Manual Length = 434 Score = 25.4 bits (53), Expect = 6.6 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +3 Query: 276 LVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSK 377 L NG+ V +D F +DV E+E + D+ K Sbjct: 118 LAEQPNGYFVLNDIFRFLREDVEEEEESPDAVEK 151 >SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 284 Score = 25.4 bits (53), Expect = 6.6 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +3 Query: 324 VNSDDVLEDENNSDSGSKSNAPLREQDRFL 413 V S +L+ E+NS++ + + P +QDR L Sbjct: 31 VISSKILQFEDNSETSLRHDLPKYDQDRLL 60 >SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 544 Score = 25.0 bits (52), Expect = 8.8 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +3 Query: 288 DNGFLVADDTFVVNSDDVLEDENNS 362 D L ++D V NSDD++ED +N+ Sbjct: 355 DGEDLESEDEEVDNSDDIVEDGDNA 379 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,347,821 Number of Sequences: 5004 Number of extensions: 46691 Number of successful extensions: 132 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 131 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 271646730 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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