Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060851.seq
(617 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 70 2e-12
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 69 4e-12
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 68 5e-12
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 67 9e-12
03_04_0055 + 16891212-16891848,16893166-16893206 65 5e-11
08_01_0498 - 4327502-4328395 63 1e-10
02_05_0591 - 30183105-30183869 54 7e-08
01_07_0092 - 41021743-41022276 54 9e-08
06_01_1181 + 10148653-10149405 53 2e-07
01_07_0091 - 41013837-41014271 52 4e-07
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 37 0.011
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 36 0.026
02_05_0592 - 30210219-30210757,30210898-30210919 36 0.026
04_03_0917 + 20798977-20801369,20801578-20801581 31 0.97
03_02_0884 + 12160453-12160518,12160598-12160696,12163223-121633... 30 1.3
05_03_0241 - 10820269-10820574,10820937-10821191 29 3.0
03_06_0145 - 31973924-31975837 29 3.9
02_04_0491 + 23417790-23417859,23418550-23418773,23418951-234189... 28 6.8
04_03_0923 + 20843477-20845044,20846081-20846996 27 9.0
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = +3
Query: 342 LEDENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
+ D + +SGS + +REQDRFLPIANI++IMK+A+P NGKIAKDA+ +Q C+S
Sbjct: 1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVS 57
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C EFIS VTSEASD+C+ EKRKTINGED+LFA+ T GF
Sbjct: 46 KDAKETLQECVS---EFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGF 93
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3
Query: 369 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
G +REQDRFLPIANI++IMK+AIP NGKIAKDA+ VQ C+S
Sbjct: 29 GGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVS 75
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C EFIS +TSEASD+C+ EKRKTING+D+L+A+ T GF
Sbjct: 64 KDAKETVQECVS---EFISFITSEASDKCQREKRKTINGDDLLWAMATLGF 111
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 4/57 (7%)
Frame = +3
Query: 351 ENNSDSGSKSNA----PLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
+++++SG SNA REQDRFLPIAN+++IMKRA+P N KI+KDA+ VQ C+S
Sbjct: 3 DSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 59
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C EFIS +T EASD+C+ EKRKTING+D+L+A+ T GF
Sbjct: 48 KDAKETVQECVS---EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 95
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 67.3 bits (157), Expect = 9e-12
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +3
Query: 348 DENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
D + G +EQDRFLPIANI +IM+RA+PENGKIAKD++ VQ C+S
Sbjct: 6 DGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVS 59
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KDSK C EFIS +TSEASD+C EKRKTING+D+++++ T GF
Sbjct: 48 KDSKESVQECVS---EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGF 95
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 6/59 (10%)
Frame = +3
Query: 351 ENNSDSGSKSN------APLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
++++DSG SN + REQDRFLPIAN+++IMK+A+P N KI+KDA+ VQ C+S
Sbjct: 3 DSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 61
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C EFIS +T EASD+C+ EKRKTING+D+L+A+ T GF
Sbjct: 50 KDAKETVQECVS---EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 97
>08_01_0498 - 4327502-4328395
Length = 297
Score = 63.3 bits (147), Expect = 1e-10
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = +3
Query: 369 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
G ++P +EQDRFLPIAN+++IMKR++P N KI+K+++ VQ C+S
Sbjct: 49 GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVS 95
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
K+SK C EFIS VT EASD+C+ EKRKTING+D+L+A+ T GF
Sbjct: 84 KESKETVQECVS---EFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGF 131
>02_05_0591 - 30183105-30183869
Length = 254
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +3
Query: 351 ENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
+ N + + AP +REQDR +PIAN+ +IM+R +P + KI+ DA+ +Q C+S
Sbjct: 16 DGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVS 69
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
E+IS +T EA++RC+ E+RKTI EDVL+A++ GF
Sbjct: 70 EYISFITGEANERCQREQRKTITAEDVLWAMSRLGF 105
>01_07_0092 - 41021743-41022276
Length = 177
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +3
Query: 390 LREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
++EQDR LPIAN+ +IMK+ +P N KI+K+A+ +Q C+S
Sbjct: 32 IKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVS 71
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFIS VT EASD+C EKRKT+NG+DV +A GF
Sbjct: 72 EFISFVTGEASDKCHKEKRKTVNGDDVCWAFGALGF 107
>06_01_1181 + 10148653-10149405
Length = 250
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +3
Query: 384 APLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
A +REQDR +PIAN+ +IM+R +P + KI+ DA+ +Q C+S
Sbjct: 27 AVVREQDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVS 68
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFIS VT EA+DRC E RKT+ ED+++A++ GF
Sbjct: 69 EFISFVTGEANDRCHREHRKTVTAEDLVWAMDRLGF 104
>01_07_0091 - 41013837-41014271
Length = 144
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXG 613
K SKR EFIS VT EAS+RC+ E+RKT+NG+DV A+ + G
Sbjct: 27 KISKRAKETIQECATEFISFVTGEASERCRRERRKTVNGDDVCHAMRSLG 76
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 399 QDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXC 503
QD LPIAN+ +IMK +P KI+K A+ +Q C
Sbjct: 5 QDNLLPIANVGRIMKDGLPPQAKISKRAKETIQEC 39
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 512 FISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
FI +++ A+D CK KR+TIN +DVL AL+ F
Sbjct: 76 FIHYLSATANDMCKESKRQTINADDVLKALDEMEF 110
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 506 IEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
+EFI+ ++SE+++ C E +KTI E VL AL GF
Sbjct: 48 VEFINLLSSESNEVCSREDKKTIAPEHVLRALQDLGF 84
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 485 GMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
G+ +EF+ V EAS++ K E R+T+ ED L + GF
Sbjct: 59 GLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGF 102
Score = 31.5 bits (68), Expect = 0.55
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 327 NSDDVLEDENNSDS--GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQX 500
N D V + SD GS +NA L P+AN+ +++K+ +P KI A+G
Sbjct: 11 NMDQVKKAAVRSDGVGGSATNAEL-------PMANLVRLIKKVLPGKAKIGGAAKGLTHD 63
Query: 501 C 503
C
Sbjct: 64 C 64
>04_03_0917 + 20798977-20801369,20801578-20801581
Length = 798
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 363 DSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD---ARGCVQXCISN 512
D G N + QDRF P+ + +P NG+I +D A GC Q C+SN
Sbjct: 344 DCGINRNTSM--QDRFHPMPCVG------LPSNGQIIEDVTSAGGCAQICLSN 388
>03_02_0884 +
12160453-12160518,12160598-12160696,12163223-12163357,
12163841-12163891,12164070-12164693,12164779-12164952,
12165047-12165272,12165368-12165459,12165551-12165649,
12165743-12165791,12165878-12165931,12166235-12166290,
12166367-12166438,12166520-12166615,12167069-12167418,
12167508-12167679,12167777-12167875,12167959-12168090,
12168185-12168288,12168369-12168401,12168744-12168930,
12169016-12169024
Length = 992
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +3
Query: 126 VLPSSLNTQFCKHYVTLSSKSSTHFFNK-RELLLKVDTKISNHGSDELGNDLVRLDNGFL 302
+LPS + + C K F +K ++LL+ V +++ S+ ++G
Sbjct: 402 LLPSDVQDKICHLLCNYFGKEDEIFEDKAKKLLIDVLLLLADCSSNYPTQPAAHENSGIE 461
Query: 303 VADDTFVVNSDDV---LEDENNSDSGSKSNAPLREQDRFLPIAN 425
+ N+DDV ++ NN S K N+ + D LPI N
Sbjct: 462 PDHEPVEENNDDVNQAVQKNNNFTSSPKGNSKIVLDDDKLPIPN 505
>05_03_0241 - 10820269-10820574,10820937-10821191
Length = 186
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +3
Query: 243 SNHGSDELGNDLVR----LDNGFLVADDTFVVNSDD 338
S HG D+LG DL+ +D GF DTF NS +
Sbjct: 85 SIHGMDQLGMDLLADIYMVDQGFNYTTDTFYSNSTE 120
>03_06_0145 - 31973924-31975837
Length = 637
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 273 DLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKS 380
D+ +D+G DD VV DV E + D GS S
Sbjct: 262 DMAHVDDGGAATDDNSVVEVTDVAEHTADVDDGSAS 297
>02_04_0491 +
23417790-23417859,23418550-23418773,23418951-23418964,
23419842-23419968,23420092-23420161,23420661-23420766,
23420849-23420966,23421457-23421576,23421679-23421859,
23421954-23422030,23422117-23422169,23422336-23422387,
23422683-23423885
Length = 804
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +3
Query: 243 SNHGSDELGNDL---VRLDNG----FLVADDTFVVNSDDVLEDEN 356
+N GSD+L +L +D F+ +DDTF +NSD+V D N
Sbjct: 527 TNFGSDDLAANLDIATDIDTEDVFTFINSDDTFGINSDEVELDPN 571
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 402 DRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCISN 512
D+F P+ +I ++ A EN K+A A C Q C+SN
Sbjct: 356 DKFYPVQSI-RLPHSA--ENVKVATSADECSQACLSN 389
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,794,466
Number of Sequences: 37544
Number of extensions: 256204
Number of successful extensions: 519
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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