Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060851.seq
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding prot... 73 1e-12
L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding pro... 73 1e-12
BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription f... 73 1e-12
BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription f... 73 1e-12
BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription f... 72 1e-12
M97388-1|AAA58442.1| 176|Homo sapiens TATA binding protein-asso... 36 0.087
BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of trans... 36 0.087
BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein. 36 0.087
BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of trans... 36 0.087
BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of trans... 36 0.087
AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of trans... 36 0.087
AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of trans... 36 0.087
Z22969-1|CAA80542.1| 1151|Homo sapiens M130 antigen cytoplasmic ... 32 1.4
BC051281-1|AAH51281.1| 1156|Homo sapiens CD163 molecule protein. 32 1.4
>X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding protein
subunit B (NF-YB) protein.
Length = 205
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 FVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCV 494
+V+ D ED N+ + + S REQD +LPIAN+A+IMK AIP+ GKIAKDA+ CV
Sbjct: 25 YVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECV 84
Query: 495 QXCIS 509
Q C+S
Sbjct: 85 QECVS 89
Score = 67.3 bits (157), Expect = 4e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C C EFIS +TSEAS+RC EKRKTINGED+LFA++T GF
Sbjct: 78 KDAKECVQECVS---EFISFITSEASERCHQEKRKTINGEDILFAMSTLGF 125
>L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding
protein subunit NF-YB. protein.
Length = 207
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 FVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCV 494
+V+ D ED N+ + + S REQD +LPIAN+A+IMK AIP+ GKIAKDA+ CV
Sbjct: 27 YVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECV 86
Query: 495 QXCIS 509
Q C+S
Sbjct: 87 QECVS 91
Score = 67.3 bits (157), Expect = 4e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C C EFIS +TSEAS+RC EKRKTINGED+LFA++T GF
Sbjct: 80 KDAKECVQECVS---EFISFITSEASERCHQEKRKTINGEDILFAMSTLGF 127
>BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 FVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCV 494
+V+ D ED N+ + + S REQD +LPIAN+A+IMK AIP+ GKIAKDA+ CV
Sbjct: 27 YVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECV 86
Query: 495 QXCIS 509
Q C+S
Sbjct: 87 QECVS 91
Score = 67.3 bits (157), Expect = 4e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C C EFIS +TSEAS+RC EKRKTINGED+LFA++T GF
Sbjct: 80 KDAKECVQECVS---EFISFITSEASERCHQEKRKTINGEDILFAMSTLGF 127
>BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 FVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCV 494
+V+ D ED N+ + + S REQD +LPIAN+A+IMK AIP+ GKIAKDA+ CV
Sbjct: 27 YVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECV 86
Query: 495 QXCIS 509
Q C+S
Sbjct: 87 QECVS 91
Score = 67.3 bits (157), Expect = 4e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C C EFIS +TSEAS+RC EKRKTINGED+LFA++T GF
Sbjct: 80 KDAKECVQECVS---EFISFITSEASERCHQEKRKTINGEDILFAMSTLGF 127
>BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = +3
Query: 333 DDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
DD + N+ + + S REQD +LPIAN+A+IMK AIP+ GKIAKDA+ CVQ C+S
Sbjct: 33 DDTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVS 91
Score = 67.3 bits (157), Expect = 4e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD+K C C EFIS +TSEAS+RC EKRKTINGED+LFA++T GF
Sbjct: 80 KDAKECVQECVS---EFISFITSEASERCHQEKRKTINGEDILFAMSTLGF 127
>M97388-1|AAA58442.1| 176|Homo sapiens TATA binding
protein-associated phosphoprotein protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of
transcription 1 variant protein.
Length = 176
Score = 36.3 bits (80), Expect = 0.087
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C ++KTI+ E V+ AL + GF
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGF 80
>Z22969-1|CAA80542.1| 1151|Homo sapiens M130 antigen cytoplasmic
variant 1 protein.
Length = 1151
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 198 FFNKRELLLKVDTKISNHGSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSK 377
FF ++ + +S+ G + + R N L ADD ++NS EN+ +S
Sbjct: 1064 FFLTKKRRQRQRLAVSSRGENLVHQIQYREMNSCLNADDLDLMNSS-----ENSHESADF 1118
Query: 378 SNAPLREQDRFLPIANIAK--IMKRAIPENGKI 470
S A L +FLPI+ + K I+ ENG +
Sbjct: 1119 SAAELISVSKFLPISGMEKEAILSHTEKENGNL 1151
>BC051281-1|AAH51281.1| 1156|Homo sapiens CD163 molecule protein.
Length = 1156
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 198 FFNKRELLLKVDTKISNHGSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSK 377
FF ++ + +S+ G + + R N L ADD ++NS EN+ +S
Sbjct: 1069 FFLTKKRRQRQRLAVSSRGENLVHQIQYREMNSCLNADDLDLMNSS-----ENSHESADF 1123
Query: 378 SNAPLREQDRFLPIANIAK--IMKRAIPENGKI 470
S A L +FLPI+ + K I+ ENG +
Sbjct: 1124 SAAELISVSKFLPISGMEKEAILSHTEKENGNL 1156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,899,160
Number of Sequences: 237096
Number of extensions: 1479237
Number of successful extensions: 2379
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2374
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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