BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060851.seq
(617 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094930-1|AAM11283.1| 156|Drosophila melanogaster RH50436p pro... 74 1e-13
AY070968-1|AAL48590.1| 156|Drosophila melanogaster RE06807p pro... 74 1e-13
AE014134-3154|AAF53839.2| 156|Drosophila melanogaster CG10447-P... 74 1e-13
DQ138728-1|ABA86334.1| 169|Drosophila melanogaster CG4185 protein. 40 0.003
AF302257-1|AAG15388.1| 183|Drosophila melanogaster NC2beta prot... 40 0.003
AE014134-2547|AAF53428.1| 183|Drosophila melanogaster CG4185-PA... 40 0.003
AY119620-1|AAM50274.1| 680|Drosophila melanogaster LD46167p pro... 30 2.9
AY071402-1|AAL49024.1| 680|Drosophila melanogaster RE48840p pro... 30 2.9
AE014297-3091|AAN13900.2| 680|Drosophila melanogaster CG6375-PB... 30 2.9
AE014297-3090|AAF55951.2| 680|Drosophila melanogaster CG6375-PA... 30 2.9
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB... 29 5.0
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 28 8.8
U84552-1|AAC27683.1| 663|Drosophila melanogaster helicase pitch... 28 8.8
L04964-1|AAA85908.1| 500|Drosophila melanogaster cactus protein. 28 8.8
L03368-1|AAA28408.1| 500|Drosophila melanogaster cactus materna... 28 8.8
L03367-1|AAA28407.1| 482|Drosophila melanogaster cactus zygotic... 28 8.8
AY069399-1|AAL39544.1| 500|Drosophila melanogaster LD10168p pro... 28 8.8
AE014134-2703|AAN10937.1| 482|Drosophila melanogaster CG5848-PC... 28 8.8
AE014134-2702|AAS64714.1| 500|Drosophila melanogaster CG5848-PD... 28 8.8
AE014134-2701|AAF53524.1| 500|Drosophila melanogaster CG5848-PB... 28 8.8
AE014134-2700|AAN10936.1| 500|Drosophila melanogaster CG5848-PA... 28 8.8
>AY094930-1|AAM11283.1| 156|Drosophila melanogaster RH50436p
protein.
Length = 156
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Frame = +3
Query: 345 EDENNSDSGSKSNAP--LREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
EDE + D K + LREQDRFLPI NI KIMK +P+NGKIAKDAR C+Q C+S
Sbjct: 19 EDEASGDDSDKQDGGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVS 75
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD++ C C EFIS ++SEA +R E RKT+NG+D+L A + GF
Sbjct: 64 KDARECIQECVS---EFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGF 111
>AY070968-1|AAL48590.1| 156|Drosophila melanogaster RE06807p
protein.
Length = 156
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Frame = +3
Query: 345 EDENNSDSGSKSNAP--LREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
EDE + D K + LREQDRFLPI NI KIMK +P+NGKIAKDAR C+Q C+S
Sbjct: 19 EDEASGDDSDKQDGGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVS 75
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD++ C C EFIS ++SEA +R E RKT+NG+D+L A + GF
Sbjct: 64 KDARECIQECVS---EFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGF 111
>AE014134-3154|AAF53839.2| 156|Drosophila melanogaster CG10447-PA
protein.
Length = 156
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Frame = +3
Query: 345 EDENNSDSGSKSNAP--LREQDRFLPIANIAKIMKRAIPENGKIAKDARGCVQXCIS 509
EDE + D K + LREQDRFLPI NI KIMK +P+NGKIAKDAR C+Q C+S
Sbjct: 19 EDEASGDDSDKQDGGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVS 75
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 464 KDSKRCXGMCSGMYIEFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
KD++ C C EFIS ++SEA +R E RKT+NG+D+L A + GF
Sbjct: 64 KDARECIQECVS---EFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGF 111
>DQ138728-1|ABA86334.1| 169|Drosophila melanogaster CG4185 protein.
Length = 169
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C + +KTIN E VL AL GF
Sbjct: 44 EFIHLISSEANEVCNMRNKKTINAEHVLEALERLGF 79
>AF302257-1|AAG15388.1| 183|Drosophila melanogaster NC2beta
protein.
Length = 183
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C + +KTIN E VL AL GF
Sbjct: 52 EFIHLISSEANEVCNMRNKKTINAEHVLEALERLGF 87
>AE014134-2547|AAF53428.1| 183|Drosophila melanogaster CG4185-PA
protein.
Length = 183
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 509 EFISXVTSEASDRCKVEKRKTINGEDVLFALNTXGF 616
EFI ++SEA++ C + +KTIN E VL AL GF
Sbjct: 52 EFIHLISSEANEVCNMRNKKTINAEHVLEALERLGF 87
>AY119620-1|AAM50274.1| 680|Drosophila melanogaster LD46167p
protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 333 DDVLE-DENNSDSGSKSNAPLREQDRFLPI-ANIAKIM-KRAIPENGKIAKD 479
D+V E DE + DSGS+ + ++D P+ A K++ ++ +NGK AKD
Sbjct: 113 DEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKD 164
>AY071402-1|AAL49024.1| 680|Drosophila melanogaster RE48840p
protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 333 DDVLE-DENNSDSGSKSNAPLREQDRFLPI-ANIAKIM-KRAIPENGKIAKD 479
D+V E DE + DSGS+ + ++D P+ A K++ ++ +NGK AKD
Sbjct: 113 DEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKD 164
>AE014297-3091|AAN13900.2| 680|Drosophila melanogaster CG6375-PB,
isoform B protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 333 DDVLE-DENNSDSGSKSNAPLREQDRFLPI-ANIAKIM-KRAIPENGKIAKD 479
D+V E DE + DSGS+ + ++D P+ A K++ ++ +NGK AKD
Sbjct: 113 DEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKD 164
>AE014297-3090|AAF55951.2| 680|Drosophila melanogaster CG6375-PA,
isoform A protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 333 DDVLE-DENNSDSGSKSNAPLREQDRFLPI-ANIAKIM-KRAIPENGKIAKD 479
D+V E DE + DSGS+ + ++D P+ A K++ ++ +NGK AKD
Sbjct: 113 DEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKD 164
>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
isoform B protein.
Length = 2048
Score = 29.1 bits (62), Expect = 5.0
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Frame = +3
Query: 222 LKVDTKISNHGSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDEN--NSDSGSKSNAPLR 395
L+ + SN ++ L NDL +L N + D ++ D+ E+E S+ N L+
Sbjct: 237 LRQQLEESNRTNEALTNDLQKLTNDWASLRDELLIKEDEFKEEEQAFKDYYNSEHNRLLK 296
Query: 396 EQDRFLPIANIAKIMKRAI-PENGKIAKDARGCVQXCISNS-----YRL*RARLVTDARL 557
+ + K M+ A+ E K+ ++ CV I+ S + + +A+ D L
Sbjct: 297 MWREVVAVKRSFKEMQTAMKAEVAKMGQEI-NCVGKDINGSNATVAFAVQQAKRAADDEL 355
Query: 558 KNARPSTGKM 587
K ++ S ++
Sbjct: 356 KQSQRSNDEL 365
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 330 SDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDAR 485
S DV + ++ S S ++S +P RE+D +++K R+ + I +D+R
Sbjct: 260 SRDVSKSKSKSHSRTRSRSPKRERDSRSRTRSVSKRESRSRSRSKSIHRDSR 311
>U84552-1|AAC27683.1| 663|Drosophila melanogaster helicase
pitchoune protein.
Length = 663
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +3
Query: 333 DDVLE-DENNSDSGSKSNAPLREQDRFLPI-ANIAKIM-KRAIPENGKIAKD 479
D+ E DE + DSGS+ + ++D P+ A K++ ++ +NGK AKD
Sbjct: 96 DEAAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKD 147
>L04964-1|AAA85908.1| 500|Drosophila melanogaster cactus protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>L03368-1|AAA28408.1| 500|Drosophila melanogaster cactus
maternal/zygotic protein protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>L03367-1|AAA28407.1| 482|Drosophila melanogaster cactus zygotic
protein protein.
Length = 482
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>AY069399-1|AAL39544.1| 500|Drosophila melanogaster LD10168p
protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>AE014134-2703|AAN10937.1| 482|Drosophila melanogaster CG5848-PC,
isoform C protein.
Length = 482
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>AE014134-2702|AAS64714.1| 500|Drosophila melanogaster CG5848-PD,
isoform D protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>AE014134-2701|AAF53524.1| 500|Drosophila melanogaster CG5848-PB,
isoform B protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
>AE014134-2700|AAN10936.1| 500|Drosophila melanogaster CG5848-PA,
isoform A protein.
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 288 DNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 401
D+GF+ + + S++++ D D + +AP +EQ
Sbjct: 73 DSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQ 110
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,951,702
Number of Sequences: 53049
Number of extensions: 459645
Number of successful extensions: 1332
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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