Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060849.seq
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 73 3e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 4e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 4e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 4e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 6e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 6e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 4e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 4e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 4e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.004
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.004
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.004
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 38 0.005
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 38 0.005
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.009
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.009
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.012
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.036
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.036
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.036
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.036
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.047
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.047
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 33 0.25
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.25
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 33 0.25
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.44
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 1.0
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 1.0
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.0
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.3
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.8
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 1.8
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.4
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.1
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.1
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 29 3.1
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 4.1
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 29 4.1
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 4.1
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 29 4.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 5.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 5.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 5.4
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 9.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 9.5
Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical p... 27 9.5
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 27 9.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 9.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 9.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 9.5
AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin... 27 9.5
AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin... 27 9.5
AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin... 27 9.5
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 9.5
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 27 9.5
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 30/111 (27%)
Frame = +3
Query: 249 QPTGHFARDCKEEAD------------RCYRCNGTGHIARECAQSPDE------------ 356
Q TGHF+RDC + CY C G GH +R+C + E
Sbjct: 41 QETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGE 100
Query: 357 ------PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGT 491
CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 101 GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +3
Query: 288 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 434
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 435 ------TCYNCNKSGHISRNCP 482
+CYNC GH SR+CP
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCP 83
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/125 (35%), Positives = 54/125 (43%), Gaps = 40/125 (32%)
Frame = +3
Query: 249 QPTGHFARDCKE-EAD----------RCYRCNGTGHIARECAQSPDEP----------SC 365
Q GH +R+C E+D CY C TGH +R+C + SC
Sbjct: 10 QQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSC 69
Query: 366 YNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPDG---- 488
YNC GH +R+CP EGG R Q CYNC +SGHISR C +
Sbjct: 70 YNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAE 129
Query: 489 TKTCY 503
K CY
Sbjct: 130 EKRCY 134
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 136 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 249
S CY C TGHF+R+C +GG G C+ C
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNC 72
Score = 37.1 bits (82), Expect = 0.012
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 432 QTCYNCNKSGHISRNCPDG 488
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 36.3 bits (80), Expect = 0.021
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 249
CY C R+GH +RECT+ G + + ++C++C
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQC 136
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 127 MSSSVCYKCNRTGHFARECTQG 192
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Frame = +1
Query: 142 CYKCNRTGHFARECT-------QGGVVSR-DSGFNRQREKCFKCNR 255
CY C GH++R+C GG R G + +KC+ C R
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGR 114
Score = 29.1 bits (62), Expect = 3.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 142 CYKCNRTGHFAREC 183
CY+C TGH +R+C
Sbjct: 133 CYQCQETGHISRDC 146
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 425
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 426 ATQTCYNCNKSG 461
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 410
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Frame = +3
Query: 249 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 392
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 393 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCY 503
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK 494
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK 494
R C+NC + GH S +CP+ K
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 425
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 426 ATQTCYNCNKSG 461
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 410
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Frame = +3
Query: 249 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 392
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 393 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCY 503
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK 494
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK 494
R C+NC + GH S +CP+ K
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 425
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 426 ATQTCYNCNKSG 461
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 255 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 410
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Frame = +3
Query: 249 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 392
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 393 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCY 503
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK 494
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 417 RESATQTCYNCNKSGHISRNCPDGTK 494
R C+NC + GH S +CP+ K
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKK 391
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +3
Query: 258 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 419
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 420 ESATQTCYNCNKSGHISRNCPDGTK 494
T+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 273 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 446
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 447 CNKSGHISRNC 479
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +3
Query: 258 GHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 356
GHFA+DC+ E R C RC GH EC P +
Sbjct: 648 GHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 509 GKPGHISRECDEARN*PQPPCLPYNQL 589
G+ GHIS+ECD+ + P+ PC QL
Sbjct: 576 GEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +3
Query: 258 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 419
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 420 ESATQTCYNCNKSGHISRNCPDGTK 494
T+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 273 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 446
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 447 CNKSGHISRNC 479
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +3
Query: 258 GHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 356
GHFA+DC+ E R C RC GH EC P +
Sbjct: 648 GHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 509 GKPGHISRECDEARN*PQPPCLPYNQL 589
G+ GHIS+ECD+ + P+ PC QL
Sbjct: 576 GEEGHISKECDKPKV-PRFPCRNCEQL 601
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Frame = +3
Query: 249 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 407
Q GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 408 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCY 503
GG E C+NC GH S CP+ + C+
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 410
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 189 GGRGVAGFRFQSAT*EVLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 411 GGRESATQTCYNCNKSGHISRNCPDGTK 494
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Frame = +3
Query: 249 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 407
Q GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 408 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCY 503
GG E C+NC GH S CP+ + C+
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 410
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 189 GGRGVAGFRFQSAT*EVLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 411 GGRESATQTCYNCNKSGHISRNCPDGTK 494
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Frame = +3
Query: 249 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 407
Q GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 408 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCY 503
GG E C+NC GH S CP+ + C+
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 410
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ 189
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 189 GGRGVAGFRFQSAT*EVLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 359
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 411 GGRESATQTCYNCNKSGHISRNCPDGTK 494
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCPEGGRESATQ-T 437
+D K C+ C GH +C + S + C+ C H C + G + T
Sbjct: 222 QDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYAT 281
Query: 438 CYNCNKSGHISRNCPDGTKTCY 503
C+ C + GHISR+C Y
Sbjct: 282 CFVCKQVGHISRDCHQNVNGVY 303
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 458
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 459 GHISRNCP 482
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 410
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 243 QVQPTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 362
+ Q +G C + +R C+RCN GHIA C + + S
Sbjct: 658 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 458
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 459 GHISRNCP 482
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 410
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 243 QVQPTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 362
+ Q +G C + +R C+RCN GHIA C + + S
Sbjct: 561 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 458
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 459 GHISRNCP 482
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 410
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 243 QVQPTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 362
+ Q +G C + +R C+RCN GHIA C + + S
Sbjct: 572 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +3
Query: 150 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQPTGHFARDCK-EEADRCYRCNGTGHI 326
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 327 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 476
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +3
Query: 150 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQPTGHFARDCK-EEADRCYRCNGTGHI 326
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 327 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 476
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 479
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 413
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 479
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 413
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.012
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 432 QTCYNCNKSGHISRNCPDG 488
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.036
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEG 413
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 127 MSSSVCYKCNRTGHFARECTQG 192
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 288 ADR-CYRCNGTGHIAREC 338
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 267 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 446
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 447 CNKSGHISRNCPDG 488
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 127 MSSSVCYKCNRTGHFARECTQGGV 198
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARNCPEGGRE 422
GH A C + R N H + + PD+ + CY C + GH A C +G
Sbjct: 213 GHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHKGALA 271
Query: 423 SATQTCY 443
+ T +
Sbjct: 272 FLSNTAH 278
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 35.5 bits (78), Expect = 0.036
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Frame = -3
Query: 495 SWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSC--NTTARPGSVRTRAL 325
S C S G CG+TCC APP S CG P C C T P + T
Sbjct: 64 SGCGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCK 112
Query: 324 CAP--CRYICSNGQPLPCNPSQSVLSVALEALLTLPIE 217
C C C+NG C ++ S +LL + E
Sbjct: 113 CCQPVCTNACTNGGGCSCGCTRGGCSRKRRSLLAIASE 150
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 363 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 485
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 363 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 485
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 363 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 485
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 294 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 422
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 363 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 485
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 297 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 461
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.33
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 357 PSCYNCNKTGHIARNCPEGGRES 425
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 438 CYNCNKSGHISRNCPDGT 491
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 234
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 443
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECA 341
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 429 TQTCYNCNKSGHISRNCPDGTKTC 500
+ TC+NC K GH + C + C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQREC 224
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 360 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 494
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 288 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 443
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 258 GHFARDCKEEADRCYRCNGTGHIARECA 341
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 429 TQTCYNCNKSGHISRNCPDGTKTC 500
+ TC+NC K GH + C + C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQREC 224
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -3
Query: 486 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 328
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 327 LCAPCRYICSNGQPLP 280
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = -3
Query: 477 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 298
S C +C + SA T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 297 NGQPLPCNPSQSVLSVALEA 238
+G C+ S S LSV + A
Sbjct: 232 SGCRSTCS-STSTLSVCIPA 250
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Frame = -3
Query: 474 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 316
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 315 CRYICSNGQPLPCNPSQSVLSVAL 244
+C P+P NP +++ A+
Sbjct: 130 SPLVCCKQAPVPENPCCQIVAAAM 153
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 324 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 488
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 27.9 bits (59), Expect = 7.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQ 189
C++C+R GHF C Q
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = -3
Query: 474 CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICSN 295
C +C TC ++ Q AP ++ P C C TT + + + CAP C
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP---QCQQ 228
Query: 294 GQPLPCNPSQSVLSVALEALLTLP 223
C QS + A + P
Sbjct: 229 PSAPQCQQCQSACQSPVVAPVVAP 252
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 348 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 482
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 297 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 410
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -3
Query: 573 RQGGCG*FRASSHSREMWPGLPTRSTSWCRRDSCGRCGRTCCSYSRSASQTPA----PPR 406
RQGGCG G C R C C R CC+ R+ T P
Sbjct: 59 RQGGCGCCGCGCGCCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPC 118
Query: 405 DSSVRCGPSCCSCNTTAR 352
CG CC C R
Sbjct: 119 CCGCGCGCGCCGCGGGGR 136
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.0
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = -3
Query: 501 STSWCRRDSCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARP 349
S+S C SC R C R C S S++ +QTP + G C S C+ T R
Sbjct: 115 SSSQCA-SSCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR- 172
Query: 348 GSVRTRALCAPCRYICSNGQPLPCNPSQS 262
S R + C C N C PSQS
Sbjct: 173 SSCSNRVSQSTCDATCQNTCSSMC-PSQS 200
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CR C C RTCC + T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CR C C RTCC + T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 124
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +3
Query: 243 QVQPTGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 407
QV P G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 408 ---EGGRESATQTCYNCNKSGHISR---NCPDG 488
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +3
Query: 243 QVQPTGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 407
QV P G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 408 ---EGGRESATQTCYNCNKSGHISR---NCPDG 488
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -3
Query: 459 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 307
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 306 --ICSNGQPLPCNPSQ 265
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 452
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 453 KSGHISRNCPDGTKTC 500
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 452
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 453 KSGHISRNCPDGTKTC 500
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 522 WPGLPTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRC 388
W G T +CR D+ G+CG CS + + + RC
Sbjct: 274 WMGANTAHNIYCRYDNVGKCGTIDCSINHFTLKAQNSSEITGDRC 318
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/39 (25%), Positives = 15/39 (38%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRQ 258
C+ C GH AR C + + G+ Q C +
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSCQAE 614
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -3
Query: 477 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 316
S +C TC S S+ TP P + V+C PSC +C + P +V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 315 CRYICSNGQPL-PCNP 271
C+ C QP+ C P
Sbjct: 159 CQQQCVQTQPIQQCQP 174
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 195 RGVAGFRF-QSAT*EVLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYN 371
+ +AG + QS + QP E + C C+GT + + D SC++
Sbjct: 222 KSLAGLSYHQSYLHDQKSSQPLVKLLSPSIEISTSCDFCSGTAFMNKNTKLPEDLVSCHD 281
Query: 372 CNKTGH 389
C ++GH
Sbjct: 282 CGRSGH 287
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 459 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 328
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 438 CYNCNKSGHISRNCP 482
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 363 CYNCNKTGHIARNCPE 410
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 267 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 410
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = -3
Query: 477 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 316
S +C TC S S+ TP P + V+C PSC +C + P V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 315 CRYICSNGQPL-PCNP 271
C+ C QP+ C P
Sbjct: 159 CQQQCVQTQPIQQCQP 174
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CRR C C RTCC + T P CG CC C R
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 135
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 489 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 352
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = -3
Query: 468 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 298
+C C ++ PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 297 NGQPL-PCNPS 268
N Q + C PS
Sbjct: 352 NAQCVQACLPS 362
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 246 VQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRES 425
+ P+ H + E D R N HI + ++ D+ S + + G + G
Sbjct: 104 LDPSSHISSAEFENMDEAERLN---HIRDQSTRAYDQ-SNFRRRQPGIMT------GPPP 153
Query: 426 ATQTCYNCNKSGHISRNCP 482
T TC C++ GH +NCP
Sbjct: 154 PTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 246 VQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRES 425
+ P+ H + E D R N HI + ++ D+ S + + G + G
Sbjct: 104 LDPSSHISSAEFENMDEAERLN---HIRDQSTRAYDQ-SNFRRRQPGIMT------GPPP 153
Query: 426 ATQTCYNCNKSGHISRNCP 482
T TC C++ GH +NCP
Sbjct: 154 PTYTCNRCSQPGHWYKNCP 172
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -3
Query: 441 SRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP---CRYICSNGQPLPCNP 271
S++A+ T P RD++V+ G + CNT + + P C C C+P
Sbjct: 272 SQTAAPTYQPYRDTNVQVGGTISQCNTCQTQCNQECQVQQTPVNQCAPQCDAQCQPACSP 331
Query: 270 SQSVLSVALEALLTLPIETGIPR 202
+ V + + L I + R
Sbjct: 332 AAPAAPVQTQQQIQLTINVPVAR 354
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -3
Query: 486 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 313
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 312 RYICSNG 292
+ CS G
Sbjct: 148 Q--CSEG 152
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 516 GLPTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCS--CNTTARPGS 343
GL ++C++ +C RC + + S S+S + DSS C + C T +
Sbjct: 176 GLQDFVNTYCQK-TCSRCASSTTTASSSSSSCTSYTADSSSACASWAANGFCTNTFYTAA 234
Query: 342 VRTRALCAPCRYIC 301
R ++ CA +C
Sbjct: 235 TR-KSYCATTCKLC 247
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 449
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 450 NKSGHISRNCPDGTKTC 500
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 449
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 450 NKSGHISRNCPDGTKTC 500
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 452
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 453 KSGHISRNCPDGTKTC 500
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 449
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 450 NKSGHISRNCPDGTKTC 500
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +3
Query: 282 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 449
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 450 NKSGHISRNCPDGTKTC 500
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 474 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 388
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical
protein F46B3.2 protein.
Length = 190
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 477 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPG 346
SCG C + + + S T P +++ C S C+ A+ G
Sbjct: 124 SCGLCTGNVTTPATTTSTTTPVPLTTTIECKDSLLRCSEMAKKG 167
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +3
Query: 390 IARNCPEG------GRESATQTCYNCNKSGHISRNCPDGTKTCY 503
++ CP G G S C N +G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Frame = -3
Query: 465 CGRTCCSYSRSASQTPAPPRDSSVR------CGPSCCSCNTTARPGSVRTRALCAP-CRY 307
C C S++ PP S + C PSC T P + ++ CAP C+
Sbjct: 658 CDPQCISFTLKLPVMTTPPPTPSCQPQCQPACQPSCMETYTFTIPMNDQSSKQCAPACQP 717
Query: 306 ICSN 295
+C +
Sbjct: 718 VCDS 721
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 447 CNKSGHISRNCPDGTKTC 500
CN G N TC
Sbjct: 2796 CNAHGDCVHNTATNNITC 2813
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 447 CNKSGHISRNCPDGTKTC 500
CN G N TC
Sbjct: 3380 CNAHGDCVHNTATNNITC 3397
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 447 CNKSGHISRNCPDGTKTC 500
CN G N TC
Sbjct: 2796 CNAHGDCVHNTATNNITC 2813
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 447 CNKSGHISRNCPDGTKTC 500
CN G N TC
Sbjct: 3380 CNAHGDCVHNTATNNITC 3397
>Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical
protein T20G5.13 protein.
Length = 237
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 470 PQLSRRHQDVLRVGKPGHISRECDEARN*PQPPCLPYNQLC 592
P+ + +H V R+ P I R C EAR P CL QLC
Sbjct: 88 PEKTSQHLSVDRLTNPNFIFRSCCEARGLPD-SCL---QLC 124
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 468 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNTTARPGSVRTRALC-APCRYICSN 295
RC TC + + P P PR S+ C PSC P V+ +LC CR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -1
Query: 275 IPRKVSCRLHL---KHFSRCRLKPESRDTTPPCVHSRA 171
IP SC L + HFS+ +L +SR P C RA
Sbjct: 203 IPSNSSCSLDMCLRSHFSQTKLDGDSRWNCPKCKEPRA 240
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.5 bits (58), Expect = 9.5
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Frame = +3
Query: 93 LKCSRIFKTDRNEFKRLLQVQPDRAFRARMHAG---GRGVAGFRFQSAT*EVLQVQPTGH 263
+ C + ++ KRLL P R++ HA GF FQ A L+ Q
Sbjct: 145 ITCHGYINGEMDDGKRLLGNIPMFPCRSKFHASCMINYNSGGFHFQYAA--RLECQARLL 202
Query: 264 FARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 422
C C CN H ++ A D C C + H+ P GGR+
Sbjct: 203 CPLHC------CNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.5 bits (58), Expect = 9.5
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Frame = +3
Query: 93 LKCSRIFKTDRNEFKRLLQVQPDRAFRARMHAG---GRGVAGFRFQSAT*EVLQVQPTGH 263
+ C + ++ KRLL P R++ HA GF FQ A L+ Q
Sbjct: 145 ITCHGYINGEMDDGKRLLGNIPMFPCRSKFHASCMINYNSGGFHFQYAA--RLECQARLL 202
Query: 264 FARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 422
C C CN H ++ A D C C + H+ P GGR+
Sbjct: 203 CPLHC------CNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 446
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 447 CNKSGHISRNCPDGTKTC 500
CN G N TC
Sbjct: 3380 CNAHGDCVHNTATNNITC 3397
>AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform d protein.
Length = 750
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 508 GQARPHLARVRRGAELAAATLSPLQSTMYIMMPRTDDKQRTPRATHDNRL 657
GQA L+RV + +++AA + Y+ +PR D+Q+ + + +L
Sbjct: 503 GQAVNDLSRVAKESDVAANGRVAAEKQAYMSLPRPGDQQKMAKVGLEMKL 552
>AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform b protein.
Length = 759
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 508 GQARPHLARVRRGAELAAATLSPLQSTMYIMMPRTDDKQRTPRATHDNRL 657
GQA L+RV + +++AA + Y+ +PR D+Q+ + + +L
Sbjct: 503 GQAVNDLSRVAKESDVAANGRVAAEKQAYMSLPRPGDQQKMAKVGLEMKL 552
>AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform a protein.
Length = 803
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 508 GQARPHLARVRRGAELAAATLSPLQSTMYIMMPRTDDKQRTPRATHDNRL 657
GQA L+RV + +++AA + Y+ +PR D+Q+ + + +L
Sbjct: 503 GQAVNDLSRVAKESDVAANGRVAAEKQAYMSLPRPGDQQKMAKVGLEMKL 552
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 456 TCCSYSRSASQTPAPPRDSSVRCGPSCCSCN--TTARPGSVRTRALC-APCRYICSNGQP 286
TCCS + + P PP D G N T + GS+ A+ PC IC G P
Sbjct: 103 TCCSCQQGPAGPPGPPGDDG-NGGQDGVRGNDGTDGKEGSLLESAIVNEPC-IICPPGPP 160
Query: 285 LP 280
P
Sbjct: 161 GP 162
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -3
Query: 462 GRTCCSYSRSASQTPAPPRDS--SVRCG-PSCCSCNTTARPGSVRTRALCAPCRYICSNG 292
G CCS S P PP + R G P + T S R APC Y C G
Sbjct: 112 GGQCCSCKTGPSGPPGPPGEDGRDGRDGKPGLNGEDGTDAKDSAPRRDAAAPC-YDCPVG 170
Query: 291 QPLP 280
P P
Sbjct: 171 PPGP 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,491
Number of Sequences: 27780
Number of extensions: 332483
Number of successful extensions: 1567
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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