Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060848.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 160 8e-40
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 160 8e-40
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 158 4e-39
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 5e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 127 1e-29
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 85 4e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 79 4e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 1e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 68 6e-12
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 66 2e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 58 5e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 6e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 40 0.002
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.008
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 34 0.12
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.1
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.7
SB_13782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.6
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 6.1
SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15) 28 8.1
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 160 bits (389), Expect = 8e-40
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 125
Query: 436 SCDCLQGFQLTH 471
SCDCLQGFQLTH
Sbjct: 126 SCDCLQGFQLTH 137
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 241
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 242 PRAI 253
PRAI
Sbjct: 61 PRAI 64
Score = 102 bits (245), Expect = 2e-22
Identities = 49/60 (81%), Positives = 50/60 (83%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE YCID L
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 160 bits (389), Expect = 8e-40
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE
Sbjct: 279 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 338
Query: 436 SCDCLQGFQLTH 471
SCDCLQGFQLTH
Sbjct: 339 SCDCLQGFQLTH 350
Score = 142 bits (345), Expect = 2e-34
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +2
Query: 35 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 214
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 215 NEASGGKYVPRAI 253
NEA+GGKYVPRA+
Sbjct: 265 NEATGGKYVPRAV 277
Score = 102 bits (245), Expect = 2e-22
Identities = 49/60 (81%), Positives = 50/60 (83%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE YCID L
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 420
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 159 bits (387), Expect = 1e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE
Sbjct: 11 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 70
Query: 436 SCDCLQGFQLTH 471
SCDC+QGFQLTH
Sbjct: 71 SCDCIQGFQLTH 82
Score = 99 bits (238), Expect = 2e-21
Identities = 47/57 (82%), Positives = 48/57 (84%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
LI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE YCID L
Sbjct: 96 LILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 152
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 158 bits (383), Expect = 4e-39
Identities = 69/72 (95%), Positives = 72/72 (100%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE
Sbjct: 66 IDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAE 125
Query: 436 SCDCLQGFQLTH 471
SCDC+QGFQLTH
Sbjct: 126 SCDCIQGFQLTH 137
Score = 134 bits (323), Expect = 8e-32
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 241
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 242 PRAI 253
PR++
Sbjct: 61 PRSV 64
Score = 102 bits (244), Expect = 3e-22
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
G LISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVE YCID L
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 241
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 242 PRAI 253
PRAI
Sbjct: 61 PRAI 64
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVF 336
VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 127 bits (306), Expect = 1e-29
Identities = 53/70 (75%), Positives = 62/70 (88%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEAE
Sbjct: 22 VDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAE 81
Query: 436 SCDCLQGFQL 465
+CDC+QG QL
Sbjct: 82 NCDCMQGVQL 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKV 584
G ++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 128 QCTGLQGFLIFH 139
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 561 QCTGLQGFLIFH 572
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 235
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 236 YVPRAI 253
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 239 VPRAI 253
VPRA+
Sbjct: 495 VPRAV 499
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E + +D +
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E + +D +
Sbjct: 586 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 642
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 713 QCTGLQGFLIFH 724
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 192 QCTGLQGFLIFH 203
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 235
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 236 YVPRAI 253
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 239 VPRAI 253
VPRA+
Sbjct: 574 VPRAV 578
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 239 VPRAI 253
VPRA+
Sbjct: 126 VPRAV 130
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E + +D +
Sbjct: 738 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 794
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 217 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 273
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 127 QCTGLQGFLIFH 138
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 239 VPRAI 253
VPRA+
Sbjct: 61 VPRAV 65
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E + +D +
Sbjct: 152 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 208
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = +1
Query: 259 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 438
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK A+
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 439 CDCLQGFQLTH 471
C LQGF + H
Sbjct: 129 CTGLQGFLIFH 139
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 235
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 236 YVPRAI 253
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAI 209
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +1
Query: 259 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 438
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 439 CDCLQGFQLTH 471
C LQGF + H
Sbjct: 933 CTGLQGFLIFH 943
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 499 GCTGLQGFLIFH 510
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 239 VPRAI 253
VPRA+
Sbjct: 433 VPRAV 437
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 239 VPRAIPSTWSP 271
VPRA+ + P
Sbjct: 866 VPRAVFADLEP 876
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 957 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 1013
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E + +D +
Sbjct: 524 LMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 580
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK A+
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 546 QCSGLQGFLVFH 557
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = +1
Query: 259 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 438
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 439 CDCLQGFQLTH 471
C LQGF + H
Sbjct: 114 CTGLQGFLIFH 124
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 238
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 239 VPRAI 253
VPRA+
Sbjct: 480 VPRAV 484
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 571 LLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAI 627
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 138 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 194
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAI 253
+G WE+ EHGI P G D + + N +++E GK+VPRA+
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAV 51
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 128 QCTGLQGFLIFH 139
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 235
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 236 YVPRAI 253
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 209
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/72 (47%), Positives = 48/72 (66%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 93 QCTGLQGFLIFH 104
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E + +D +
Sbjct: 118 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAI 174
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
G L+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ CID L
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEAL 115
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1
Query: 340 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 471
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 78.6 bits (185), Expect = 4e-15
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 435
VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK +
Sbjct: 979 VDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTD 1038
Query: 436 SCDCLQGFQLTH 471
C LQGF + H
Sbjct: 1039 QCSGLQGFLIFH 1050
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 531 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
+Y + ++V P+P +S VVEPYN+ L+ H +E + +D +
Sbjct: 1071 DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAI 1120
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +1
Query: 280 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 459
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 460 QLTH 471
+ H
Sbjct: 73 LIFH 76
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 90 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 146
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +1
Query: 286 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 465
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 466 TH 471
H
Sbjct: 63 FH 64
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 78 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 134
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.1 bits (159), Expect = 6e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 286 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 465
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 466 TH 471
H
Sbjct: 63 FH 64
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 78 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 134
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 641
G ++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLE 75
Score = 34.3 bits (75), Expect = 0.093
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 418 VRKEAESCDCLQGFQLTH 471
+RKEAE CD +QGFQL H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 286 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 426
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 235
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 236 YVPRAI 253
+VPRA+
Sbjct: 61 HVPRAV 66
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +1
Query: 319 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 471
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF + H
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFH 129
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 235
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 236 YVPRAIPSTWSPAPWTLS 289
+VPRA+ P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E + +D +
Sbjct: 143 LMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 199
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 286 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 426
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 319 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 459
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 71 IVHIQAGQCGNQIGAKFWEIISDE 142
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 62 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 229
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 230 GKY 238
GK+
Sbjct: 254 GKH 256
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 284 LMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 340
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 119 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 220
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +1
Query: 256 VDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLD 414
VD E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 415 VVRKEAESCDCLQGFQLTH 471
+RKE E CD G + H
Sbjct: 103 AMRKEVERCDSFAGTIVMH 121
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 510 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCIDKRGL 680
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E + +D +
Sbjct: 28 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 84
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 501 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 641
G +++ + ++YPD T +V PS D + PYN+ L++HQL E
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTE 207
Score = 35.1 bits (77), Expect = 0.053
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 256 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 363
+D+E G ++++ GP +F + SG GNNW
Sbjct: 80 IDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 522 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 641
+ ++YPD T +V PS D + PYN+ L++HQL E
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTE 59
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -2
Query: 456 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 277
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 276 GAGLQVDGMARGTYL 232
G+ G Y+
Sbjct: 264 RCGIWKKGRESLVYV 278
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 437 DSASFRTTSKTESTSSAPSV*CPLAQL 357
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 374 CPLAQLLPAPDCPKTKLSGRKICP 303
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 374 CPLAQLLPAPDCPKTKLSGRKICP 303
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 374 CPLAQLLPAPDCPKTKLSGRKICP 303
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_13782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +3
Query: 537 PDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRRNYCI 665
P R ++ + P V++ ++P +A +S ++ + HRR + +
Sbjct: 52 PKRSLSLTNTTPVRFVNEKAIDPTSAVISTNEFLRTHRRQWIV 94
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 513 ISKIREEYPDRIMNTYSVVPSPKVS 587
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 350 APDCPKTKLSGRKICPKGPERTESMVPGSKST 255
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 513 ISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVEKH 647
+SKI EY + + + + V+P PK+ D + +P+ L V QL+E++
Sbjct: 24 VSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLEQN 70
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 338 PKTKLSGRKICPKGPERTESMVPGSKSTGWRG 243
P T++ G+ IC K +R+ ++ GW G
Sbjct: 2178 PDTRVQGKPICGKQTQRSSCQKERQRARGWSG 2209
>SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15)
Length = 875
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 450 PGIPTDTLARRRHRFRYGHPLISKIREEYPDRIMNTYSVVPSPKV 584
P +P D L R R R+ L+ +RE Y ++ Y+ + S +
Sbjct: 531 PTLPEDFLYPLRLRKRFSSALMKTVREFYSKEVVGIYTHIKSAAI 575
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 450 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 283
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,932,023
Number of Sequences: 59808
Number of extensions: 442965
Number of successful extensions: 1581
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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