SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060847.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46892-1|CAA86994.1|  558|Drosophila melanogaster Calpain, witho...   118   6e-27
Z46891-1|CAA86993.1|  828|Drosophila melanogaster Calpain protein.    118   6e-27
X78555-2|CAA55298.1|  828|Drosophila melanogaster calpain protein.    118   6e-27
X78555-1|CAA55297.1|  805|Drosophila melanogaster calpain protein.    118   6e-27
AY051678-1|AAK93102.1|  828|Drosophila melanogaster LD22862p pro...   118   6e-27
AE013599-2881|AAF57564.1|  565|Drosophila melanogaster CG7563-PA...   118   6e-27
AE013599-2880|AAF57563.1|  828|Drosophila melanogaster CG7563-PB...   118   6e-27
AE014296-1773|AAF50189.2|  925|Drosophila melanogaster CG8107-PA...   111   1e-24
AF062404-1|AAD04331.2|  925|Drosophila melanogaster calpain prot...   107   1e-23
AY061567-1|AAL29115.1|  681|Drosophila melanogaster SD01079p pro...    40   0.003
AJ538040-1|CAD61271.1|  681|Drosophila melanogaster calpain-C pr...    40   0.003
AE014298-2367|AAF48591.2|  681|Drosophila melanogaster CG3692-PA...    40   0.003
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo...    29   4.5  
AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p pro...    29   4.5  
AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic ...    29   4.5  
AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC...    29   4.5  
AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD...    29   4.5  
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB...    29   4.5  

>Z46892-1|CAA86994.1|  558|Drosophila melanogaster Calpain, without
           calmodulin-likedomain protein.
          Length = 558

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 46  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 104

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 105 RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 161

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 162 VIPAEQSFEENYAGIFHFRFWQ 183



 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++ NE+F KKE + K  LPS
Sbjct: 31  VGSVYNEIFIKKEADTKRVLPS 52


>Z46891-1|CAA86993.1|  828|Drosophila melanogaster Calpain protein.
          Length = 828

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 46  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 104

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 105 RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 161

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 162 VIPAEQSFEENYAGIFHFRFWQ 183



 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++ NE+F KKE + K  LPS
Sbjct: 31  VGSVYNEIFIKKEADTKRVLPS 52


>X78555-2|CAA55298.1|  828|Drosophila melanogaster calpain protein.
          Length = 828

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 46  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 104

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 105 RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 161

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 162 VIPAEQSFEENYAGIFHFRFWQ 183



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++INE+F KKE + K  LPS
Sbjct: 31  VGSVINEIFIKKEADTKRVLPS 52


>X78555-1|CAA55297.1|  805|Drosophila melanogaster calpain protein.
          Length = 805

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 23  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 81

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 82  RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 138

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 139 VIPAEQSFEENYAGIFHFRFWQ 160



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++INE+F KKE + K  LPS
Sbjct: 8   VGSVINEIFIKKEADTKRVLPS 29


>AY051678-1|AAK93102.1|  828|Drosophila melanogaster LD22862p
           protein.
          Length = 828

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 46  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 104

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 105 RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 161

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 162 VIPAEQSFEENYAGIFHFRFWQ 183



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++INE+F KKE + K  LPS
Sbjct: 31  VGSVINEIFIKKEADTKRVLPS 52


>AE013599-2881|AAF57564.1|  565|Drosophila melanogaster CG7563-PA,
           isoform A protein.
          Length = 565

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 46  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 104

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 105 RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 161

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 162 VIPAEQSFEENYAGIFHFRFWQ 183



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++INE+F KKE + K  LPS
Sbjct: 31  VGSVINEIFIKKEADTKRVLPS 52


>AE013599-2880|AAF57563.1|  828|Drosophila melanogaster CG7563-PB,
           isoform B protein.
          Length = 828

 Score =  118 bits (285), Expect = 6e-27
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 227 TENVSAQYQDYKVLXETRPSSFGP-ATYQDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYK 403
           T+ V    ++ +VL E + SS GP +  QD++ I + CLA G LFEDP FPA + SL + 
Sbjct: 46  TKRVLPSIKNMRVLGE-KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS 104

Query: 404 ESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYP 583
              DR I WLRP EI++NPQ FVEGYSRFDVQQGE  +  CWL   T + +   S+  + 
Sbjct: 105 RRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGE--LGDCWLLAATAN-LTQESNLFFR 161

Query: 584 MIRVSMKI---MRGVFHFRFWQ 640
           +I           G+FHFRFWQ
Sbjct: 162 VIPAEQSFEENYAGIFHFRFWQ 183



 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 183 LGNIINEVFQKKEVEQKTFLPS 248
           +G++INE+F KKE + K  LPS
Sbjct: 31  VGSVINEIFIKKEADTKRVLPS 52


>AE014296-1773|AAF50189.2|  925|Drosophila melanogaster CG8107-PA
           protein.
          Length = 925

 Score =  111 bits (266), Expect = 1e-24
 Identities = 55/113 (48%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
 Frame = +2

Query: 311 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 490
           DF+ +R  CLA G +FEDP+FPA + SL Y    DR   WLRPG+I+D+PQ FVEGYSRF
Sbjct: 245 DFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIADDPQFFVEGYSRF 304

Query: 491 DVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHFRFWQ 640
           DVQQGE  +  CWL L     +   S+  + +I           G+FHF+FWQ
Sbjct: 305 DVQQGE--LGDCWL-LAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQ 354


>AF062404-1|AAD04331.2|  925|Drosophila melanogaster calpain
           protein.
          Length = 925

 Score =  107 bits (258), Expect = 1e-23
 Identities = 54/113 (47%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
 Frame = +2

Query: 311 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 490
           DF+ +R  CLA G +FEDP+FPA + SL Y    DR   WLRPG+I+ +PQ FVEGYSRF
Sbjct: 245 DFQSLRDSCLANGTMFEDPDFPATNASLMYSRRPDRYYEWLRPGDIAGDPQFFVEGYSRF 304

Query: 491 DVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHFRFWQ 640
           DVQQGE  +  CWL L     +   S+  + +I           G+FHF+FWQ
Sbjct: 305 DVQQGE--LGECWL-LAAAANLTQDSTLFFRVIPPDQDFQENYAGIFHFKFWQ 354


>AY061567-1|AAL29115.1|  681|Drosophila melanogaster SD01079p
           protein.
          Length = 681

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
 Frame = +2

Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN-----------P 460
           ++ I S C ++  L+EDP+FPAV  S++Y ++      W R  +++D+            
Sbjct: 5   YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAA 64

Query: 461 QLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKI--MRGVFHFRF 634
            +F+   + FDV  G+      WL +     ++S  +  Y ++     +    GVF FR 
Sbjct: 65  PVFLNETAEFDVVPGKMG--DRWL-VSCLGLLSSLRNLFYRVVPADQTLASAHGVFRFRL 121

Query: 635 W 637
           W
Sbjct: 122 W 122


>AJ538040-1|CAD61271.1|  681|Drosophila melanogaster calpain-C
           protein.
          Length = 681

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
 Frame = +2

Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN-----------P 460
           ++ I S C ++  L+EDP+FPAV  S++Y ++      W R  +++D+            
Sbjct: 5   YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAA 64

Query: 461 QLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKI--MRGVFHFRF 634
            +F+   + FDV  G+      WL +     ++S  +  Y ++     +    GVF FR 
Sbjct: 65  PVFLNETAEFDVVPGKMG--DRWL-VSCLGLLSSLRNLFYRVVPADQTLASAHGVFRFRL 121

Query: 635 W 637
           W
Sbjct: 122 W 122


>AE014298-2367|AAF48591.2|  681|Drosophila melanogaster CG3692-PA
           protein.
          Length = 681

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
 Frame = +2

Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN-----------P 460
           ++ I S C ++  L+EDP+FPAV  S++Y ++      W R  +++D+            
Sbjct: 5   YERILSDCRSKNVLWEDPDFPAVQSSVFYYQTPPFTFQWKRIMDLADSGSGAVAANSSAA 64

Query: 461 QLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKI--MRGVFHFRF 634
            +F+   + FDV  G+      WL +     ++S  +  Y ++     +    GVF FR 
Sbjct: 65  PVFLNESAEFDVVPGKMG--DRWL-VSCLGLLSSLRNLFYRVVPADQTLASAHGVFRFRL 121

Query: 635 W 637
           W
Sbjct: 122 W 122


>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
            protein protein.
          Length = 1597

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 314  FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESL----DRPIT-WLRPGEIS 451
            +++I   C     LF D  FP   +SLYY  +       P+  W RP EI+
Sbjct: 1004 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEIN 1054


>AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p protein.
          Length = 1593

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 314  FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESL----DRPIT-WLRPGEIS 451
            +++I   C     LF D  FP   +SLYY  +       P+  W RP EI+
Sbjct: 1000 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEIN 1050


>AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic lobes
            protein.
          Length = 1597

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 314  FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESL----DRPIT-WLRPGEIS 451
            +++I   C     LF D  FP   +SLYY  +       P+  W RP EI+
Sbjct: 1004 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEIN 1054


>AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC,
           isoform C protein.
          Length = 1000

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESL----DRPIT-WLRPGEIS 451
           +++I   C     LF D  FP   +SLYY  +       P+  W RP EI+
Sbjct: 407 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEIN 457


>AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD,
           isoform D protein.
          Length = 1240

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESL----DRPIT-WLRPGEIS 451
           +++I   C     LF D  FP   +SLYY  +       P+  W RP EI+
Sbjct: 647 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEIN 697


>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
            isoform B protein.
          Length = 1594

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 314  FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESL----DRPIT-WLRPGEIS 451
            +++I   C     LF D  FP   +SLYY  +       P+  W RP EI+
Sbjct: 1001 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEIN 1051


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,039,277
Number of Sequences: 53049
Number of extensions: 695615
Number of successful extensions: 2007
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -