Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060847.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 97 1e-20
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 96 2e-20
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 96 2e-20
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 96 2e-20
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 93 2e-19
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 93 2e-19
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 91 7e-19
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 64 1e-10
AF040660-1|AAC71148.1| 634|Caenorhabditis elegans Hypothetical ... 29 4.1
Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical p... 28 7.1
Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical pr... 28 7.1
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 96.7 bits (230), Expect = 1e-20
Identities = 52/113 (46%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +2
Query: 311 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 490
+F+ R RCL + LFEDP+FPA D SLYYK D PI W RPGEI +NPQL V SRF
Sbjct: 296 NFQQERQRCLDQRCLFEDPQFPANDSSLYYKTRPDEPIIWKRPGEIYENPQLIVGEKSRF 355
Query: 491 DVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHFRFWQ 640
DV+QG A+ CWL L + Y ++ G+FHF+FW+
Sbjct: 356 DVKQG--ALGDCWL-LAAVANLTLRDELFYRVVPPDQSFTENYAGIFHFQFWR 405
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +2
Query: 281 PSSFGPATY-QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN 457
P S P T QDF ++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+
Sbjct: 245 PISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITRE 304
Query: 458 PQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHF 628
PQL EG+SRFDV QGE + CWL L + Y ++ G+FHF
Sbjct: 305 PQLITEGHSRFDVIQGE--LGDCWL-LAAAANLTLKDELFYRVVPPDQSFTENYAGIFHF 361
Query: 629 RFWQ 640
+FWQ
Sbjct: 362 QFWQ 365
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +2
Query: 281 PSSFGPATY-QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN 457
P S P T QDF ++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+
Sbjct: 270 PISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITRE 329
Query: 458 PQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHF 628
PQL EG+SRFDV QGE + CWL L + Y ++ G+FHF
Sbjct: 330 PQLITEGHSRFDVIQGE--LGDCWL-LAAAANLTLKDELFYRVVPPDQSFTENYAGIFHF 386
Query: 629 RFWQ 640
+FWQ
Sbjct: 387 QFWQ 390
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +2
Query: 281 PSSFGPATY-QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDN 457
P S P T QDF ++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+
Sbjct: 291 PISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITRE 350
Query: 458 PQLFVEGYSRFDVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHF 628
PQL EG+SRFDV QGE + CWL L + Y ++ G+FHF
Sbjct: 351 PQLITEGHSRFDVIQGE--LGDCWL-LAAAANLTLKDELFYRVVPPDQSFTENYAGIFHF 407
Query: 629 RFWQ 640
+FWQ
Sbjct: 408 QFWQ 411
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/112 (44%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +2
Query: 311 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 490
DF+ R +CL LFEDPEFPA SLYY+ I W RPGEI NPQL +G SRF
Sbjct: 226 DFETEREKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRF 285
Query: 491 DVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHFRFW 637
DV+QG A+ CW L I Y + Y ++ + G+FHF+FW
Sbjct: 286 DVKQG--ALGDCWF-LAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFW 334
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/112 (44%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +2
Query: 311 DFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRF 490
DF+ R +CL LFEDPEFPA SLYY+ I W RPGEI NPQL +G SRF
Sbjct: 226 DFETEREKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRF 285
Query: 491 DVQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHFRFW 637
DV+QG A+ CW L I Y + Y ++ + G+FHF+FW
Sbjct: 286 DVKQG--ALGDCWF-LAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFW 334
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 91.1 bits (216), Expect = 7e-19
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = +2
Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFD 493
F + R +CL E RLFEDP+FPA + S+YYK+ I WLRP +I NP+L V G SRFD
Sbjct: 144 FYEERQKCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANPRLIVNGKSRFD 203
Query: 494 VQQGEWAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMR---GVFHFRFWQ 640
V+QG ++ CW L +A Y ++ G+FHF+FW+
Sbjct: 204 VRQG--SLGNCWF-LAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFWR 252
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Frame = +2
Query: 314 FKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFD 493
F + R +CL E RLFEDP+FPA + S+Y K I W RPGE+ NP+L + FD
Sbjct: 202 FHEERQKCLDEKRLFEDPQFPANNSSIYVKVRPKDHIVWKRPGELFANPRLIGSDKTHFD 261
Query: 494 VQQG----EWAIVGCW-LPLPT*HFIASYSSKSYPMIRVSMKIMRGVFHFRFWQ 640
V+ G W + G L L F + P + + G+FHF+FW+
Sbjct: 262 VKLGRLENRWFLSGAANLSLRDELFY-----RVVPPDQSFTEKYAGIFHFQFWR 310
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +1
Query: 520 WLLAAVANLTLHRKLFFQVVPDDQSFDEDYAGRLPFPFLAVTGAWV 657
W L+ ANL+L +LF++VVP DQSF E YAG F F G WV
Sbjct: 271 WFLSGAANLSLRDELFYRVVPPDQSFTEKYAGIFHFQFWRY-GEWV 315
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +2
Query: 308 QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSR 487
Q+++ +R C+ + + F D FP ++SL+ ++ I W RPGE+ +P LFVEG S
Sbjct: 13 QNYEKLRKICIKKKQPFVDTLFPPTNQSLFLEQRQSSDIVWKRPGELHPDPHLFVEGASP 72
Query: 488 FDVQQGE----WAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMRGVFHFRFWQ 640
DV QG W + C +A + + G+F FRFW+
Sbjct: 73 NDVTQGILGNCWFVSACSALTHNFKLLAQVIPDADDQEWSTKHAYAGIFRFRFWR 127
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +2
Query: 308 QDFKDIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSR 487
Q+++ +R C+ + + F D FP ++SL+ ++ I W RPGE+ +P LFVEG S
Sbjct: 13 QNYEKLRKICIKKKQPFVDTLFPPTNQSLFLEQRQSSDIVWKRPGELHPDPHLFVEGASP 72
Query: 488 FDVQQGE----WAIVGCWLPLPT*HFIASYSSKSYPMIRVSMKIMRGVFHFRFWQ 640
DV QG W + C +A + + G+F FRFW+
Sbjct: 73 NDVTQGILGNCWFVSACSALTHNFKLLAQVIPDADDQEWSTKHAYAGIFRFRFWR 127
>AF040660-1|AAC71148.1| 634|Caenorhabditis elegans Hypothetical
protein W05G11.4 protein.
Length = 634
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 508 VGDCWLLAAVANLTLHRKLFFQVVPDDQ 591
VGDCWLL+A+A + ++ ++P Q
Sbjct: 150 VGDCWLLSAMALIAEKPEVLDAIIPKKQ 177
>Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 508 VGDCWLLAAVANLTLHRKLFFQVVPDDQ 591
VGDCWL++A+A + + ++P Q
Sbjct: 203 VGDCWLMSAMALIAERPDVLDDIIPKKQ 230
>Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 508 VGDCWLLAAVANLTLHRKLFFQVVPDDQ 591
VGDCWL++A+A + + ++P Q
Sbjct: 203 VGDCWLMSAMALIAERPDVLDDIIPKKQ 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,972,984
Number of Sequences: 27780
Number of extensions: 340585
Number of successful extensions: 1021
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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