Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060846.seq
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 149 6e-35
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 143 3e-33
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 129 5e-29
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 129 5e-29
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 122 6e-27
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 114 2e-24
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 111 1e-23
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 111 2e-23
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 106 4e-22
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 106 6e-22
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 103 5e-21
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 101 2e-20
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 101 2e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 7e-20
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 97 4e-19
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 78 2e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 75 2e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 72 2e-11
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 65 1e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 59 1e-07
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 54 2e-06
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 51 2e-05
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 50 7e-05
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 45 0.002
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 44 0.003
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.019
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 41 0.032
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.30
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 38 0.30
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.70
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.70
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 36 0.70
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.1
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 35 2.1
UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;... 34 2.8
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.7
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.9
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 8.6
UniRef50_Q2CHG8 Cluster: Type I secretion target repeat protein;... 33 8.6
UniRef50_Q120B1 Cluster: Enoyl-CoA hydratase/isomerase; n=4; Pro... 33 8.6
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 8.6
UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 33 8.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 149 bits (361), Expect = 6e-35
Identities = 76/143 (53%), Positives = 84/143 (58%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
++G + P P + K + + +
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK + G LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 143 bits (347), Expect = 3e-33
Identities = 73/143 (51%), Positives = 87/143 (60%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
Q++G ++ FP + + ++ + + +
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I KVYKSQR RAG+G MR+RR
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRR 203
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+ + LP VF APIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 129 bits (312), Expect = 5e-29
Identities = 69/146 (47%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 34 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINL 93
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*G---AS 605
ARG + P P + + + + S++ A
Sbjct: 94 NQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAV 153
Query: 606 RHGLIILKVYKSQRLRAGKGKMRNRR 683
G K S++LRAGKGK+R RR
Sbjct: 154 GAGADCEKAKNSRKLRAGKGKLRGRR 179
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 129 bits (312), Expect = 5e-29
Identities = 69/146 (47%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 57 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINL 116
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRH- 611
ARG + P + ++ + R +++ G +
Sbjct: 117 GQKRFATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTV 176
Query: 612 GLI--ILKVYKSQRLRAGKGKMRNRR 683
G + + KV S++LRAGKGK+R RR
Sbjct: 177 GALKDVEKVKDSRKLRAGKGKLRGRR 202
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +1
Query: 91 ARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSKE 255
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 122 bits (295), Expect = 6e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 175 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 109 VYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSKE 255
VY++KS + LP VF AP+RPD+V+ VH + KN RQPY VS E
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVE 174
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 114 bits (274), Expect = 2e-24
Identities = 66/147 (44%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Frame = +3
Query: 252 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 431
GAG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116
Query: 432 XXXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PT--KSKRSTRPN-RLSSS*GA 602
ARG + P + +S + T+ + S G
Sbjct: 117 LKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGL 176
Query: 603 SRHGLIILKVYKSQRLRAGKGKMRNRR 683
+ ++ KS +LRA GKMRNR+
Sbjct: 177 RDE---VNRLIKSXKLRARXGKMRNRK 200
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCV 246
++ RPL +VY V G + +P VF PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 111 bits (268), Expect = 1e-23
Identities = 62/145 (42%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 59 AGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINT 118
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
ARG + P P + + + + + G
Sbjct: 119 TEKRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKG 178
Query: 615 L--IILKVYKSQRLRAGKGKMRNRR 683
L + ++ S +R GKGKMRNRR
Sbjct: 179 LEEEMKRIESSIAIRCGKGKMRNRR 203
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVS 249
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVS 56
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 111 bits (266), Expect = 2e-23
Identities = 63/150 (42%), Positives = 77/150 (51%)
Frame = +3
Query: 234 ALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 413
A+ R G H SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RR
Sbjct: 52 AVNRLSGMNH--SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRR 109
Query: 414 WHXXXXXXXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS 593
WH +RG + P P + + + +
Sbjct: 110 WHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAF 169
Query: 594 *GASRHGLIILKVYKSQRLRAGKGKMRNRR 683
A + +V S+ +RAG+GKMRNRR
Sbjct: 170 LKAIAAIDDVNRVNDSREIRAGRGKMRNRR 199
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +1
Query: 91 ARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
ARP VSVYS S +V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 106 bits (255), Expect = 4e-22
Identities = 55/143 (38%), Positives = 70/143 (48%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 58 AGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNV 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
ARG + P P + ++ + A +
Sbjct: 118 TQRRFAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKAS 177
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
+ +S+R+R G GK RNRR
Sbjct: 178 DDVKHSAESKRIRVGSGKARNRR 200
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 100 LVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPY 240
L +VY+ A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVP-SVIRYSPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 106 bits (254), Expect = 6e-22
Identities = 57/143 (39%), Positives = 73/143 (51%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 53 AGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINK 112
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
+RG + P P++ ++ + L
Sbjct: 113 NQRKSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTLGIN 172
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I+ K ++L++GKGKMRNRR
Sbjct: 173 SIVRNKLK-RKLKSGKGKMRNRR 194
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 103 bits (246), Expect = 5e-21
Identities = 59/145 (40%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 59 AGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNI 118
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
ARG + + P P + + K + + R G
Sbjct: 119 KQKRHAAATAVAATGIVPLVLARGHRISQVPQIPLV--VEDKIESYEKTTDALNFLKRFG 176
Query: 615 LI--ILKVYKSQRLRAGKGKMRNRR 683
+ KV ++ +RAG K R ++
Sbjct: 177 AFEDVQKVVSTKVVRAGISKQRGKK 201
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 97 PLVSVYS-EKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSKE 255
PLVSV+S + S V PLP VF PIRPD+V+ VH +++KN RQ + V+ +
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQ 58
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 101 bits (242), Expect = 2e-20
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
+G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 57 SGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +1
Query: 94 RPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 101 bits (242), Expect = 2e-20
Identities = 57/145 (39%), Positives = 72/145 (49%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 428
+ AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 53 KNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKV 112
Query: 429 XXXXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASR 608
+ARG + P + ++ +
Sbjct: 113 VENTKKIAEAMAVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLN 172
Query: 609 HGLIILKVYKSQRLRAGKGKMRNRR 683
+ +V KS+ +R GKGKMRNRR
Sbjct: 173 MTEELKRVEKSRGVRCGKGKMRNRR 197
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +1
Query: 103 VSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ Y TV+ LP VF PIR DLV + +RQPY VSK
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSK 53
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.5 bits (237), Expect = 7e-20
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
+G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 57 SGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +1
Query: 88 VARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
V RP+VSV+S + G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 97.1 bits (231), Expect = 4e-19
Identities = 59/147 (40%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 58 AGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPK 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKS----KRSTRPNRLSSS*GA 602
ARG + P P + +KS K++ + L A
Sbjct: 118 QMRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINA 177
Query: 603 SRHGLIILKVYKSQRLRAGKGKMRNRR 683
+LKV S+ +RAG+GKMR R+
Sbjct: 178 YSD---VLKVIASKTVRAGQGKMRGRK 201
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 91 ARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVS 249
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVS 55
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 78.2 bits (184), Expect = 2e-13
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +3
Query: 240 LREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
++ +G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 54 IKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/94 (40%), Positives = 45/94 (47%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 55 AGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPS 114
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFP 536
QARG +L P
Sbjct: 115 RQRKFAIASAIAATAVVPLVQARGHVLGEVKEVP 148
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/51 (33%), Positives = 35/51 (68%)
Frame = +1
Query: 88 VARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPY 240
++R V+V +++ + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2
Query: 509 IIXKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
++ ++ E+P+VV D VQEI +T+ AV L+++ + D
Sbjct: 140 VLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGD 176
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 71.7 bits (168), Expect = 2e-11
Identities = 50/144 (34%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 54 AGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNL 107
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPN-RLSSS*GASRH 611
+ARG + PS P + T + T+ + + G R
Sbjct: 108 NQRRYAVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTKDALAIIKAVGVLRD 167
Query: 612 GLIILKVYKSQRLRAGKGKMRNRR 683
+ + S+ +RAG+GKMRNRR
Sbjct: 168 ---VERCKDSRHIRAGRGKMRNRR 188
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 97 PLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
P V V+ V A P P VF P+RPD++N VH + K R PY VS+
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +2
Query: 509 IIXKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD
Sbjct: 8 VVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSD 44
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 621 ILKVYKSQRLRAGKGKMRNRR 683
+LKVYKSQRLRAGKGKMRNRR
Sbjct: 45 VLKVYKSQRLRAGKGKMRNRR 65
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/145 (28%), Positives = 61/145 (42%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 428
+GAG + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 429 XXXXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASR 608
ARG ++ + PS P + +++ R A
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALG 192
Query: 609 HGLIILKVYKSQRLRAGKGKMRNRR 683
+ + + ++RAGKGKMR RR
Sbjct: 193 LWPDVERAAEGVKIRAGKGKMRGRR 217
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 54.4 bits (125), Expect = 2e-06
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 1/144 (0%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXX 431
AG +TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 52 AGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVN 110
Query: 432 XXXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRH 611
+ RG ++ P P + + K + + +
Sbjct: 111 RKERRAALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGL 170
Query: 612 GLIILKVYKSQRLRAGKGKMRNRR 683
+ + ++R+RAGKGK R RR
Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRR 194
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = +2
Query: 512 IXKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
I ++PELPLVV DKV+ KT++AV+ L++LKAW+D
Sbjct: 7 IGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWND 42
Score = 36.3 bits (80), Expect = 0.70
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 621 ILKVYKSQRLRAGKGKMRN 677
I KVY SQR+RAGKGKMRN
Sbjct: 43 IKKVYASQRMRAGKGKMRN 61
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGG 332
+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 46 ESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 40.3 bits (90), Expect = 0.043
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 621 ILKVYKSQRLRAGKGKMRNRR 683
I KVY SQR+RAGKGKMRNRR
Sbjct: 121 IKKVYASQRMRAGKGKMRNRR 141
Score = 33.5 bits (73), Expect = 4.9
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +2
Query: 410 ALAPSRQPPTAESGLGGSRCCYRRPSARSG*RTIIXKIP-ELPLVVA-------DKVQEI 565
A++ S T+ G R P R G TI+ ++ E+ +V A KV+
Sbjct: 43 AVSESAGYQTSAESWGTGRARGPMPRVRGGGLTILARVLLEICVVEAACLHQPGHKVEGY 102
Query: 566 NKTKQAVIFLRRLKAWSD 619
KTK+ V+ L++LKAW+D
Sbjct: 103 KKTKEEVLLLKKLKAWND 120
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 207 RFYVQELEAALL---REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 377
R ++ E A L R+ AG +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 378 GRMFAPTK 401
GR P +
Sbjct: 101 GRAAHPPR 108
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 44.0 bits (99), Expect = 0.003
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AG +T+AES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 53 AGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINK 107
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL--*PTKSKRSTRPNR-LSSS*GAS 605
+ RG + P++ ++ ++T+ R + G
Sbjct: 108 KERTLAIRSAIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIM 167
Query: 606 RHGLIILKVYKSQRLRAGKGKMRNRR 683
I++ K +++++GKGK+R R+
Sbjct: 168 DD---IVRAKKGRKIKSGKGKLRGRK 190
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 329 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 433
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 40.7 bits (91), Expect = 0.032
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 3/150 (2%)
Frame = +3
Query: 243 REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHX 422
R+ AG +TSAES+G +AR+PRV+ SG+ A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 423 XXXXXXXXXXXXXXXXXXXXXXXXQARGQLL---XRFPSFPWL*PTKSKRSTRPNRLSSS 593
+ARG + RFP K ++
Sbjct: 110 EANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKK 169
Query: 594 *GASRHGLIILKVYKSQRLRAGKGKMRNRR 683
G + +V + R+RAGKGKMR R+
Sbjct: 170 IGVYDD---VERVKERIRIRAGKGKMRGRK 196
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 290 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 454
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 455 GGSRCCYRRPSARS 496
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 255 AGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 401
AG SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 52 AGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 36.3 bits (80), Expect = 0.70
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +3
Query: 252 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
GA H AE + T AR PR GGG HR GA G + RGG
Sbjct: 186 GAPH-AEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 139 GAAKPLPFVFXAPIRPDLVNDVHVSMSKN 225
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
Score = 36.3 bits (80), Expect = 0.70
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 521 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
+PE+PLVV D I KT +AV L++L A++D
Sbjct: 150 VPEVPLVVDDSASSIKKTAKAVELLKQLGAYAD 182
Score = 35.1 bits (77), Expect = 1.6
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Frame = +3
Query: 405 WRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKS---KRSTRP 575
WRRWH ARG + P P + + K++ +
Sbjct: 111 WRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKA 170
Query: 576 NRLSSS*GASRHGLIILKVYKSQRLRAGKGKMRNRR 683
L GA I KV S+ +R+GKGKMRNRR
Sbjct: 171 VELLKQLGAYAD---IEKVKASRNVRSGKGKMRNRR 203
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 512 IXKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
I +PELPLV+ D + + KT A+ L++ A+ D
Sbjct: 7 IESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLD 42
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 243 REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 383
RE G G A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 225 LEAALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 347
L A+ R G G +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 375 HDTCYRRHPDRTYEYHHHGHAEFGRQH 295
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 527 ELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
+LP+VV D V+ INKTK A+ L+ L + D
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYED 170
>UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;
n=1; Janibacter sp. HTCC2649|Rep: Hypothetical short
chain dehydrogenase - Janibacter sp. HTCC2649
Length = 217
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 240 LREQGAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGG 380
+R+QG GH + SWG + + PRV G H ++CR G
Sbjct: 123 MRDQGFGHVVNVTSWGVQKKQPKFSPRVEVGARHMGPHRRARDLCRRG 170
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 384 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 271
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 360 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 265
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 387 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 271
TY+ H Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 393 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 256
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 293
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +2
Query: 389 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 499
RP A AA P RQ P E GGS Y P+ RSG
Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158
>UniRef50_Q2CHG8 Cluster: Type I secretion target repeat protein; n=1;
Oceanicola granulosus HTCC2516|Rep: Type I secretion
target repeat protein - Oceanicola granulosus HTCC2516
Length = 11286
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -1
Query: 378 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLLAHAVGLPRVL 220
HH + H + H HGH G +H + H FG QLL +G VL
Sbjct: 10553 HHSDDHHHHHHGDDDDHGHGHGHHGHKHGSFDP-WHVFGLQLLEPGIGGDDVL 10604
>UniRef50_Q120B1 Cluster: Enoyl-CoA hydratase/isomerase; n=4;
Proteobacteria|Rep: Enoyl-CoA hydratase/isomerase -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 262
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 315 AEFGRQHVQYPMIQHWFGDQLLAHAVGLPRVL 220
A FG QH Q+ +I W G Q + VGL R L
Sbjct: 131 ARFGDQHAQFGLIPGWGGSQRMPRIVGLRRGL 162
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 384 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLLAHAV 238
YV H H DR E+ H A G H P+I HWF + H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 366
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 150 APPVRVQXAH-PSGPGQ*CSRFYVQELEAALLREQ----GAGHQTSAESWGTGRAVARIP 314
APP V H GPG+ + V ++ R + G GHQ S + T A AR+
Sbjct: 68 APPASVWAVHVDGGPGERAALVLVDRVDDGGRRTELLAGGGGHQASLAAT-TPAAAARLG 126
Query: 315 RVRGGGTHRSG 347
+V G HR G
Sbjct: 127 QVLGEAAHRRG 137
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 390 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLL 250
R + HHD + +H R ++HHHGH GR+ H D+ L
Sbjct: 443 RDHHHHD--HHQHDRRLRDHHHHGHRLRGRRRRDRHRRDHHHHDRCL 487
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 390 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 298
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 416
+G S E+WG G AR+PR + G + GGR P KP R+W
Sbjct: 52 SGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKW 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,428,722
Number of Sequences: 1657284
Number of extensions: 12990315
Number of successful extensions: 40252
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 37058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39740
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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