Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060846.seq
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4 prot...   150   5e-36
D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.     149   9e-36
BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4 va...   149   9e-36
AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4 pr...   149   9e-36
AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4 va...   148   2e-35
AK128408-1|BAC87425.1|  189|Homo sapiens protein ( Homo sapiens ...    38   0.044

>L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4
           protein.
          Length = 426

 Score =  150 bits (363), Expect = 5e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +  FP  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 71.3 bits (167), Expect = 3e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++VARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56


>D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 441

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 72  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 131

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 132 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 191

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 192 NDIKKVYASQRMRAGKGKMRNRR 214



 Score = 69.7 bits (163), Expect = 9e-12
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +1

Query: 79  SLSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           +++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14  AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70


>AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  149 bits (361), Expect = 9e-36
 Identities = 76/143 (53%), Positives = 84/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                ++G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56


>AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 427

 Score =  148 bits (359), Expect = 2e-35
 Identities = 76/143 (53%), Positives = 83/143 (58%)
 Frame = +3

Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
           AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH     
Sbjct: 58  AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117

Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
                                 +G  +   P  P +   K +   +           +  
Sbjct: 118 TQKRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAW 177

Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
             I KVY SQR+RAGKGKMRNRR
Sbjct: 178 NDIKKVYASQRMRAGKGKMRNRR 200



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +1

Query: 82  LSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
           ++ ARPL+SVYSEK  +  G    LP VF APIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56


>AK128408-1|BAC87425.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46551 fis, clone THYMU3038687. ).
          Length = 189

 Score = 37.5 bits (83), Expect = 0.044
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
 Frame = +2

Query: 290 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 454
           WT CR  +AC  W     W++ V +GC      W    + H         R+P   E  L
Sbjct: 79  WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138

Query: 455 GGSRCCYRRPSARS 496
            G+  C   P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,956,731
Number of Sequences: 237096
Number of extensions: 2006197
Number of successful extensions: 4916
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4812
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)