Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060846.seq
(684 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 143 2e-34
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 143 2e-34
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 143 2e-34
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 143 2e-34
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 119 4e-27
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.9
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 30 2.6
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 30 2.6
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 30 2.6
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 30 2.6
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 30 3.4
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 30 3.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 143 bits (347), Expect = 2e-34
Identities = 73/143 (51%), Positives = 87/143 (60%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
Q++G ++ FP + + ++ + + +
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I KVYKSQR RAG+G MR+RR
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRR 203
Score = 67.3 bits (157), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+ + LP VF APIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 143 bits (347), Expect = 2e-34
Identities = 73/143 (51%), Positives = 87/143 (60%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
Q++G ++ FP + + ++ + + +
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I KVYKSQR RAG+G MR+RR
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRR 203
Score = 67.3 bits (157), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+ + LP VF APIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 143 bits (347), Expect = 2e-34
Identities = 73/143 (51%), Positives = 87/143 (60%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
Q++G ++ FP + + ++ + + +
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I KVYKSQR RAG+G MR+RR
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRR 203
Score = 67.3 bits (157), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+ + LP VF APIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 143 bits (347), Expect = 2e-34
Identities = 73/143 (51%), Positives = 87/143 (60%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLXRFPSFPWL*PTKSKRSTRPNRLSSS*GASRHG 614
Q++G ++ FP + + ++ + + +
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 615 LIILKVYKSQRLRAGKGKMRNRR 683
I KVYKSQR RAG+G MR+RR
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRR 203
Score = 67.3 bits (157), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFXAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+ + LP VF APIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 119 bits (286), Expect = 4e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +3
Query: 261 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 419
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53
Score = 56.0 bits (129), Expect = 5e-08
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +2
Query: 509 IIXKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 619
+I + E PLVV+D+VQ++ KTKQAVIFLRRLK W+D
Sbjct: 84 VIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 120
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 293 TCCRP-NSACPWWWYS*VRSGC 355
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 293 TCCRP-NSACPWWWYS*VRSGC 355
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 293 TCCRP-NSACPWWWYS*VRSGC 355
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 81 SIGSPTFSVGVFREE*XGAGCSQAPPVRV--QXAHPSGPG 194
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 81 SIGSPTFSVGVFREE*XGAGCSQAPPVRV--QXAHPSGPG 194
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,575,746
Number of Sequences: 53049
Number of extensions: 637152
Number of successful extensions: 3569
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3425
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -