Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060836.seq
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 115 1e-24
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 112 9e-24
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 109 8e-23
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 107 2e-22
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 103 3e-21
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 102 1e-20
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 101 1e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 101 2e-20
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 101 2e-20
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 101 2e-20
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 100 3e-20
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 99 5e-20
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 99 9e-20
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 98 2e-19
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 97 4e-19
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 96 6e-19
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 96 8e-19
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 95 1e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 95 2e-18
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 94 3e-18
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 93 6e-18
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 91 2e-17
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 89 7e-17
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 87 3e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 87 3e-16
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 87 4e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 83 6e-15
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 82 1e-14
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 81 2e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 80 4e-14
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 79 1e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 77 5e-13
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 76 1e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 73 5e-12
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 73 5e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 7e-12
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 73 7e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 69 8e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 69 1e-10
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 67 4e-10
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 63 7e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 7e-09
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 62 9e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 62 2e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 61 3e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 61 3e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 60 7e-08
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 60 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 58 2e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 58 3e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 58 3e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 58 3e-07
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 57 4e-07
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 57 5e-07
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 56 6e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 56 8e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 55 1e-06
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 55 2e-06
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 54 3e-06
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 54 4e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 54 4e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 53 8e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 53 8e-06
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 53 8e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 52 1e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 52 1e-05
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 52 1e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 52 2e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 51 2e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 51 2e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 51 3e-05
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 51 3e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 50 4e-05
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 50 5e-05
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 50 7e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 49 9e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 49 1e-04
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 49 1e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 46 9e-04
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 45 0.002
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 45 0.002
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 44 0.003
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 43 0.008
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 42 0.019
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 41 0.025
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 41 0.025
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 41 0.033
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 38 0.18
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 37 0.41
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.41
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 37 0.54
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 36 0.71
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 35 1.6
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 35 2.2
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 5.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 115 bits (276), Expect = 1e-24
Identities = 54/61 (88%), Positives = 56/61 (91%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV AVGITAF LLLSLPVLAGAIT+LLTDRN NTSFFDPAGGGDP LYQHLF FFGH
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 237
Query: 690 P 692
P
Sbjct: 238 P 238
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 433 ISS 441
ISS
Sbjct: 152 ISS 154
Score = 74.9 bits (176), Expect = 2e-12
Identities = 41/82 (50%), Positives = 44/82 (53%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMP 69
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N LVPL+LGAPD+AF
Sbjct: 70 IMIGGFGNWLVPLMLGAPDMAF 91
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 112 bits (269), Expect = 9e-24
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLF+ AVGITA LLLSLPVLAGAIT+LLTDRN NTSFFDPAGGGDP LYQHLF FFGH
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 213
Query: 690 P 692
P
Sbjct: 214 P 214
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 433 ISS 441
ISS
Sbjct: 128 ISS 130
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/55 (60%), Positives = 36/55 (65%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AF
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAF 67
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 109 bits (261), Expect = 8e-23
Identities = 51/61 (83%), Positives = 55/61 (90%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV +V +TAF LLLSLPVLAGAIT+LLTDRN NT+FFDPAGGGDP LYQHLF FFGH
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGH 243
Query: 690 P 692
P
Sbjct: 244 P 244
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 433 ISS 441
+SS
Sbjct: 158 VSS 160
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMV 73
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N VP+++GAPD+AF
Sbjct: 74 MPAMIGGFGNWFVPILIGAPDMAF 97
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 107 bits (258), Expect = 2e-22
Identities = 50/61 (81%), Positives = 54/61 (88%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV A+ +TA LLLSLPVLAGAIT+LLTDRN NTSF+DPAGGGDP LYQHLF FFGH
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGH 240
Query: 690 P 692
P
Sbjct: 241 P 241
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 433 ISS 441
ISS
Sbjct: 155 ISS 157
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAF 94
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 103 bits (248), Expect = 3e-21
Identities = 50/60 (83%), Positives = 52/60 (86%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV AV ITA LLLSLPVLAGAIT+LLTDRN NTSFFDPAGGGDP LYQHLF F GH
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG
Sbjct: 14 PRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAG 73
Query: 433 ISS 441
+ S
Sbjct: 74 VXS 76
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 102 bits (244), Expect = 1e-20
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV ++ +TAF LLL++PVLAGAIT+LLTDRN NTSFFD +GGGDP LYQHLF FFGH
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGH 248
Query: 690 P 692
P
Sbjct: 249 P 249
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 433 ISS 441
SS
Sbjct: 163 ASS 165
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMV 78
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++G+PD+AF
Sbjct: 79 MPVMIGGFGNWLVPIMIGSPDMAF 102
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 101 bits (243), Expect = 1e-20
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 513 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
PLFV AV +TA LLLSLPVLA IT+LLTDRN NT+FFDPAGGGDP LYQHLF FFGHP
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 433 ISS 441
+SS
Sbjct: 155 VSS 157
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 73 ILIGGFGNWLVPLMIGAPDMAF 94
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 101 bits (241), Expect = 2e-20
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 513 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
PLFV +V ITA LLLSLPVLA IT+LLTDRN NT+FFDPAGGGDP LYQHLF FFGHP
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMP 73
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAF 95
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 101 bits (241), Expect = 2e-20
Identities = 48/61 (78%), Positives = 52/61 (85%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+ LF +V ITA LLLSLPVLAGAIT+LLTDRN NTSFFDP+GGGDP LYQHLF FFGH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 690 P 692
P
Sbjct: 225 P 225
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 433 ISS 441
SS
Sbjct: 139 ASS 141
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++F
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSF 78
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 101 bits (241), Expect = 2e-20
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 513 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
PLFV +V ITA LLLSLPVLA IT+LLTDRN NT+FFDPAGGGDP LYQHLF FFGHP
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 433 ISS 441
+SS
Sbjct: 155 VSS 157
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMP 72
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 73 IMIGGFGNWLVPLMIGAPDMAF 94
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 100 bits (240), Expect = 3e-20
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = +3
Query: 513 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
PLFV +V +TA LLLSLPVLA IT+LLTDRN NT+FFDPAGGGDP LYQHLF FFGHP
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 433 ISS 441
+SS
Sbjct: 155 VSS 157
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 73 VMIGGFGNWLVPLMIGAPDMAF 94
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 99 bits (238), Expect = 5e-20
Identities = 45/61 (73%), Positives = 53/61 (86%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLF +V +TA+ LLLSLPVLAGAIT+LLTDRN T+FFDPAGGGDP L+QH+F FFGH
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGH 346
Query: 690 P 692
P
Sbjct: 347 P 347
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 433 ISS 441
SS
Sbjct: 261 ASS 263
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 99.1 bits (236), Expect = 9e-20
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2
Query: 488 NRILXIVVIKLIAPIIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLE 309
+R+L VV+K AP I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L
Sbjct: 62 DRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLN 121
Query: 308 INNIREGGRSQNLILFIRG 252
+ ++EGG +QNL+LFIRG
Sbjct: 122 KSKVKEGGSNQNLMLFIRG 140
Score = 88.2 bits (209), Expect = 2e-16
Identities = 49/93 (52%), Positives = 56/93 (60%)
Frame = -1
Query: 297 KGGG*ESKSYIIYSWNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 118
K GG + NA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 117 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 19
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = -3
Query: 673 NKC*YXIGSPPPAGSKNDVFXFRSVNNIVIAPAKTGSDNNXXNAVIPTAHTNKGNDQM 500
NKC + IGSPPPAGSK +VF FRSV +IVIAPA TGS++N AV T TN G M
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV +V +TAF LLL+LPVLA AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGH
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGH 283
Query: 690 P 692
P
Sbjct: 284 P 284
Score = 50.0 bits (114), Expect = 5e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 420
PR+NNI F V NGAGTG TVY PLS++ G +VD+AI SL
Sbjct: 135 PRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSL 193
Query: 421 HLAGISS 441
H+AG SS
Sbjct: 194 HIAGASS 200
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
+PLFV +V ITA LLLSLPVLAGAIT+LLTDR NT+FFDPAGGGDP LYQHLF FFG
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 433 ISS 441
+SS
Sbjct: 156 LSS 158
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/98 (35%), Positives = 45/98 (45%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMP 73
Query: 188 XXXXXXXN*LVPLILGAPDIAFHE*II*DFDSYPPPLY 301
N VPL++GAPD+AF F PP L+
Sbjct: 74 TMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF 674
LPLFV A+ +TA LLLSLPVLAGAIT+LLTDRN NTSF+DPAGGGDP LYQHLF
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 433 ISS 441
ISS
Sbjct: 155 ISS 157
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAF 94
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 95.9 bits (228), Expect = 8e-19
Identities = 47/61 (77%), Positives = 50/61 (81%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
L LF AV ITA LLLSLPVLAG IT++LTDRN NTSFF+ AGGGDP LYQHLF FFGH
Sbjct: 182 LILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGH 241
Query: 690 P 692
P
Sbjct: 242 P 242
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 184
+DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 185 XXXXXXXXN*LVPLILGAPDIAF 253
N L+PL LG PD+ F
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGF 95
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/61 (72%), Positives = 51/61 (83%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV ++ ITAF LLLSLPVL+ IT+LL DRN NTSFF+ +GGGDP LY+HLF FFGH
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGH 241
Query: 690 P 692
P
Sbjct: 242 P 242
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 37.9 bits (84), Expect = 0.23
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D AF
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAF 95
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV A+ ITAF LLLSLPVL+ IT+LL DRN NTSFF+ AGGGDP YQH F FFGH
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGH 241
Query: 690 P 692
P
Sbjct: 242 P 242
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
EL PGS L G+ Q++N +V HA N ++PL++GA D++F
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSF 95
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 94.3 bits (224), Expect = 3e-18
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV +V +T+F +++++PVLA AIT+LL DRN NTSF+DP GGGD LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 690 P 692
P
Sbjct: 245 P 245
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/63 (50%), Positives = 34/63 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 433 ISS 441
I S
Sbjct: 159 IGS 161
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
EL PG L G+ YN I T H N VP+++GAPD++F
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSF 98
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3
Query: 516 LFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF 674
LFV +V ITA LLLSLPVLAGAIT+LLTDRN NTSFFDPAGGGDP LYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 433 ISS 441
+SS
Sbjct: 138 VSS 140
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AF
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAF 77
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 91.1 bits (216), Expect = 2e-17
Identities = 46/61 (75%), Positives = 49/61 (80%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
L LF AV ITA LLLSLPVLA AIT+LLTDRN NTSF++ AGGGD LYQHLF FFGH
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGH 267
Query: 690 P 692
P
Sbjct: 268 P 268
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 433 ISS 441
ISS
Sbjct: 182 ISS 184
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 184
+DI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 185 XXXXXXXXN*LVPLILGAPDIAF 253
N L+P+++G PD+AF
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAF 121
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 89.4 bits (212), Expect = 7e-17
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
LPLFV ++ ITAF LLLSLPVL+ IT+LL DRN NTSFF+ +GGGDP LY+HLF FFG
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 37.9 bits (84), Expect = 0.23
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D AF
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAF 95
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 690 P 692
P
Sbjct: 259 P 259
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 690 P 692
P
Sbjct: 259 P 259
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
LPLFV A+ ITA LLL+LPVL+ +T+LL DRN NTSFF+ AGGGDP LY+HLF FFG
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 35.9 bits (79), Expect = 0.94
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DI LY EL PG L G++Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N ++PL++GA D AF
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAF 95
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
S LF+ A ITA L+++LPVLAG +T++L DRN NTSF+D GGGD L+QH+F FFG
Sbjct: 183 SWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFG 242
Query: 687 HP 692
HP
Sbjct: 243 HP 244
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 433 ISS 441
ISS
Sbjct: 158 ISS 160
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 104 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
G L GD Q YN ++T+H N +P++ G PD+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVF 97
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +3
Query: 516 LFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
+ V A T+ LLLSLPVLA IT+LL DRN T+FF+P+GGGDP L+QHLF FFGHP
Sbjct: 273 IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHP 331
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 331 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP LY+H+F FFG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+ +FV +T+F L+LS+PVLAG++ LL DRN NTSF+D GG+P LYQHLF FFGH
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGH 250
Query: 690 P 692
P
Sbjct: 251 P 251
Score = 39.5 bits (88), Expect = 0.076
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+ IGT Y EL +PG G Q+YN+++T H
Sbjct: 22 KTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLV 81
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N ++PL+LGAP++AF
Sbjct: 82 MPILIGGFGNWMLPLMLGAPEMAF 105
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+N + F + G G+ T YPPLS S+D I LH G
Sbjct: 106 PRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVG 164
Query: 433 ISS 441
I S
Sbjct: 165 IGS 167
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
++PLF AV TA LLLSLPVLA +T+ + DRN NTSFF+ AGGGD LYQHLF ++
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWN 245
Query: 687 HP 692
HP
Sbjct: 246 HP 247
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +1
Query: 256 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 435
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 436 SS 441
SS
Sbjct: 162 SS 163
Score = 41.5 bits (93), Expect = 0.019
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
SL LF ++ + + L+LSLPVLA IT++LTD++ T F+D GGDP LYQHLF FFG
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFG 223
Query: 687 HP 692
HP
Sbjct: 224 HP 225
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 334 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF 674
LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP LY+H+F
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3
Query: 513 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
P+ + + T+ L+ S+PVLA +T+LL DR+ +TSF+ P GGGDP L+QHLF FFGHP
Sbjct: 185 PMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHP 244
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 433 ISS 441
+SS
Sbjct: 157 MSS 159
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +3
Query: 537 ITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
IT+ LLL+LPVL G + +LL+D + NT FFDP GDP LYQHLF FFGHP
Sbjct: 196 ITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHP 247
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 429
PRIN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 430 GISS 441
G++S
Sbjct: 160 GVAS 163
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 433 ISS 441
ISS
Sbjct: 144 ISS 146
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 61
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GAPD+AF
Sbjct: 62 IMIGGFGNWLIPLMIGAPDMAF 83
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3
Query: 513 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDP 635
PLFV AV ITA LLLSLPVLA IT+LLTDRN NT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +3
Query: 486 IK*YXI*SLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQ 665
IK + S+PLF A+ T+ +LLS PVLA A+ +L D TSFF+P GGGDP +YQ
Sbjct: 184 IKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQ 243
Query: 666 HLF*FFGHP 692
HLF F+ HP
Sbjct: 244 HLFWFYSHP 252
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 433 ISS 441
ISS
Sbjct: 155 ISS 157
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAF 94
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAG 581
LPLFV A+ +TA LLLSLPVLAG
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 69.3 bits (162), Expect = 8e-11
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 528 AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
++ +T+F LLLSLPV+ ++ DR+ NT FF+ + GDP LYQHLF FFGHP
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHP 247
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+N +E G+GTG T+YPPLS+++++ G +D IF L AG
Sbjct: 103 PRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAG 160
Query: 433 ISS 441
I+S
Sbjct: 161 IAS 163
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV ++ +T+F ++L++P + A T L+ DR T FF+PA GGD L+QHLF FFGH
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGH 256
Query: 690 P 692
P
Sbjct: 257 P 257
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +3
Query: 585 ITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
IT++LTDRN NTSFF+ AGGGDP L+QHLF FFGHP
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHP 267
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 420
PR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 421 HLAGISS 441
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 184
+DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 185 XXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++G PD+AF
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAF 123
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV + AF L+ + PVL A LL DR+ T FF P GGD L+QHLF FFGH
Sbjct: 199 MPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGH 258
Query: 690 P 692
P
Sbjct: 259 P 259
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 417
PR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 521 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNXISTFILIFWT 688
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+FV L+ LP L G +LL D + TSFF P GGGDP L+QH F F+ H
Sbjct: 207 MPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSH 266
Query: 690 P 692
P
Sbjct: 267 P 267
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +3
Query: 537 ITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
+T+ L+ SLP+L AIT LL DRN N++ +D GDP LYQHLF FFGHP
Sbjct: 202 VTSILLIGSLPILGVAITGLLLDRNINSTIYDVI--GDPVLYQHLFWFFGHP 251
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 426
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 427 AGISS 441
GISS
Sbjct: 165 LGISS 169
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +3
Query: 555 LLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
L+ +P LAGA+T+L D+ T+FF+PA GGDP +YQ++F F+ HP
Sbjct: 152 LVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHP 197
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 101 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
PG + D + YN ++T H N L+PL++GA D+AF
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAF 52
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV + + A ++L+LP L A+ +LL DR ++FFDP GG L+QH F FGH
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGH 259
Query: 690 P 692
P
Sbjct: 260 P 260
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+D GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 14 KDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMP 73
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAF 95
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 369
PR+NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 59.7 bits (138), Expect = 7e-08
Identities = 53/181 (29%), Positives = 70/181 (38%), Gaps = 1/181 (0%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFHE*II 268
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AF
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 269 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHXXX 448
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 449 XXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 625
C+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 626 F 628
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 388 GRSVDLAIFSLHLAGISS 441
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 319 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3
Query: 516 LFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LF ++ IT +LSLP+LAG IT+LL+DRN N FF GG P L+Q++ FGH
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGH 73
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P ++ +T L PVL A+ ++ DR+ T+FF+ A GGDP L QHLF FFGH
Sbjct: 342 MPFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGH 401
Query: 690 P 692
P
Sbjct: 402 P 402
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNX-NTSFFDPAGGGDPXLYQHLF*FFG 686
+PLFV A+ T+ +L+ PV+ G + +L+T N FDPA GGDP L+QHLF F+
Sbjct: 207 MPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYS 265
Query: 687 HP 692
HP
Sbjct: 266 HP 267
Score = 33.9 bits (74), Expect = 3.8
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
EL PG I D YN T H N ++PL+LGA D+AF
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAF 124
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPA-----GGGDPXLYQHLF 674
LPL + + +TA L +PVL A +LL DR+ T FF GGGDP L+QHLF
Sbjct: 214 LPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLF 273
Query: 675 *FFGHP 692
FGHP
Sbjct: 274 WIFGHP 279
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 334 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLFV ++ T+ +L+ PVL ++ ++ + FDPA GGDP L+QH F F+ H
Sbjct: 200 LPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSH 259
Query: 690 P 692
P
Sbjct: 260 P 260
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
EL PG I D YN + T H N L+P+++GA D+AF
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAF 117
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+FV AV + +F ++ +LP L A +L DR FF A GDP L+QHLF FFGH
Sbjct: 204 MPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGH 262
Query: 690 P 692
P
Sbjct: 263 P 263
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLFV TA +++++P L + +R T FFD A GG P L+Q LF FFGH
Sbjct: 179 MPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGH 238
Query: 690 P 692
P
Sbjct: 239 P 239
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3
Query: 552 LLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
+L + P+ A+ +LL DRN T+FF AGG DP +QHLF FFGHP
Sbjct: 250 ILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHP 295
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PL + ++ +L++LP A A+ +LLTDR + FF+PA GGDP Y HLF F H
Sbjct: 183 VPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFH 242
Query: 690 P 692
P
Sbjct: 243 P 243
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 510 LPLFV*AVGITAFXL-LLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFG 686
L +FV A + AF L L+ +PVL A+T+L D+ T FFD A GGD YQ+LF F+
Sbjct: 181 LNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYS 239
Query: 687 HP 692
HP
Sbjct: 240 HP 241
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3
Query: 552 LLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
+L + P+L AI +LL DRN TSFF AG G L+QHLF FFGHP
Sbjct: 282 ILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHP 326
Score = 37.1 bits (82), Expect = 0.41
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 187
+DIG LY EL +PG + + YN+++T+H
Sbjct: 95 KDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLFAT 153
Query: 188 XXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D+AF
Sbjct: 154 PIIAAFSNYLIPLLIGADDMAF 175
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F A+ I A ++++ P + A +L +R+ FF GGDP L+QHLF FFGH
Sbjct: 207 MPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGH 266
Query: 690 P 692
P
Sbjct: 267 P 267
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 53.6 bits (123), Expect = 4e-06
Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDP----AG------GGDPXL 659
LPL + A ITA LLS PVL A +L+ DR+ TSFF AG GG P L
Sbjct: 233 LPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVL 292
Query: 660 YQHLF*FFGHP 692
+QHLF F GHP
Sbjct: 293 FQHLFWFLGHP 303
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFF-----DPAGGGDPXLYQHLF 674
+ LF +V + ++ +LP LA +LL +R+ FF DPA GDP L+QH+F
Sbjct: 186 MSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIF 245
Query: 675 *FFGHP 692
FFGHP
Sbjct: 246 WFFGHP 251
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 52.8 bits (121), Expect = 8e-06
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDP-----------AGGGDPX 656
LPL + A+ ITA +LPVL A ++L DR T FF P AGGG P
Sbjct: 219 LPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPL 278
Query: 657 LYQHLF*FFGHP 692
L+QHLF F+ HP
Sbjct: 279 LWQHLFWFYSHP 290
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 433 ISS 441
ISS
Sbjct: 145 ISS 147
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +3
Query: 552 LLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*F 680
L+LS PVLA AIT+L R N SFF P G P + F F
Sbjct: 185 LILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LPLF + + +L + P L + +++ DR T+FF+P GG+ +++HLF FGH
Sbjct: 190 LPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGH 249
Query: 690 P 692
P
Sbjct: 250 P 250
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PL+ V + +L + P L + +R + FFDP GGDP L+QHLF FGH
Sbjct: 223 MPLYAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGH 282
Query: 690 P 692
P
Sbjct: 283 P 283
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LP+ V + L+++P ++ A +L DRN T FFD A GG P L+QHLF F H
Sbjct: 217 LPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAH 276
Query: 690 P 692
P
Sbjct: 277 P 277
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +3
Query: 609 NXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
N T+FFDPAGGGD L+QHLF FFGHP
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHP 218
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P++V +V + L SL L A ++L +R S+F+PA GGDP L+Q F F+ H
Sbjct: 191 MPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSH 250
Query: 690 P 692
P
Sbjct: 251 P 251
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFF-DPAGGGDPXLYQHLF*FFG 686
+P+F ++ T +L + P L +LL DRN T FF +PAGG L+ HLF FFG
Sbjct: 190 MPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFG 247
Query: 687 HP 692
HP
Sbjct: 248 HP 249
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAF 94
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F A+ + A ++ + P + A +L +R + FF GGDP L+QHLF FFGH
Sbjct: 266 MPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGH 325
Query: 690 P 692
P
Sbjct: 326 P 326
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/71 (43%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPA----------GGGDPXL 659
LPL V + LL+ P L +LL DR TSFF P GGG P L
Sbjct: 211 LPLTVWGIFTATVMALLAFPALFVGSVMLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLL 270
Query: 660 YQHLF*FFGHP 692
+QHLF FFGHP
Sbjct: 271 FQHLFWFFGHP 281
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F + + + LL P+L A +L DR +DPA GG L+QHLF FFGH
Sbjct: 207 MPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGH 265
Query: 690 P 692
P
Sbjct: 266 P 266
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+FV +T+ ++ + P + A+ +L+ DR +FF+ GG YQHLF FGH
Sbjct: 201 MPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGH 260
Query: 690 P 692
P
Sbjct: 261 P 261
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+ + + TAF + ++ P L +L +R FFD GGDP L+QHLF FGH
Sbjct: 223 MPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGH 282
Query: 690 P 692
P
Sbjct: 283 P 283
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDR 608
+PLF+ AV IT LLLSLPVLAGAIT+LLTDR
Sbjct: 122 VPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 361 PLSSNIAHRGRSVDLAIFSLHLAGISS 441
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F +TA +L P L +L +R + FF A GGD L+QHLF FGH
Sbjct: 197 MPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGH 256
Query: 690 P 692
P
Sbjct: 257 P 257
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 181
+DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMV 74
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N VP+++G+PD+AF
Sbjct: 75 MPAMIGGFGNWFVPILIGSPDMAF 98
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 537 ITAFXLLLSLPVLAGAITILLTDRNXNT 620
ITA LLLSLPVLAGAIT+LLTDRN NT
Sbjct: 174 ITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 524 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 628
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 46.0 bits (104), Expect = 9e-04
Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAG-----------GGDPX 656
+P+ A IT+ LL+ VL A +L DR TSFF P+G GG
Sbjct: 218 MPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSAL 277
Query: 657 LYQHLF*FFGHP 692
L+QHLF FFGHP
Sbjct: 278 LWQHLFWFFGHP 289
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAG-----------GGDPX 656
LP+ + + ITA +LPVL + + DR T FF P+G GG P
Sbjct: 222 LPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPL 281
Query: 657 LYQHLF*FFGHP 692
L+QHLF F+ HP
Sbjct: 282 LWQHLFWFYSHP 293
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F IT ++ + PVL A+ +L DR FF GG P L+ +LF +GH
Sbjct: 221 MPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGH 280
Query: 690 P 692
P
Sbjct: 281 P 281
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P++ +TA +L P L +L +R FF A GGD L+QHLF FGH
Sbjct: 197 MPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGH 256
Query: 690 P 692
P
Sbjct: 257 P 257
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F ++ T+ LL+L L A + + S F+P GG P LYQ F F+ H
Sbjct: 199 MPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSH 258
Query: 690 P 692
P
Sbjct: 259 P 259
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 41.5 bits (93), Expect = 0.019
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F + S P+L GA+ +L DR + FF GG+ +Y +LF +GH
Sbjct: 226 MPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGH 285
Query: 690 P 692
P
Sbjct: 286 P 286
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
LP V T L + P+L A+ +L DR T FF GG+ LY +LF +GH
Sbjct: 244 LPFVVWTSLTTNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGH 303
Query: 690 P 692
P
Sbjct: 304 P 304
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 40.7 bits (91), Expect = 0.033
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+P+F ++ S P+L A+ +L DR + F GG+P +Y +LF +GH
Sbjct: 225 MPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGH 284
Query: 690 P 692
P
Sbjct: 285 P 285
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFF-----------DPAGGGDPX 656
+P+F ++ +T + +L + L A+ IL +D T++F D G
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 657 LYQHLF*FFGHP 692
L+ HLF FFGHP
Sbjct: 252 LWAHLFWFFGHP 263
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 608 KLKYIIF*SCWRRRPNXISTFILIFWT 688
K KYIIF S W +STFILIFWT
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWT 33
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 37.1 bits (82), Expect = 0.41
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 489 K*YXI*SLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQH 668
K Y + +LPLFV AV A P + G +LL + S++ GG ++++
Sbjct: 204 KGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWEN 262
Query: 669 LF*FFGHP 692
LF +FGHP
Sbjct: 263 LFWYFGHP 270
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 36.7 bits (81), Expect = 0.54
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3
Query: 258 NK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 422
NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 36.3 bits (80), Expect = 0.71
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 510 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGH 689
+PLF TA ++ ++P L L DR + FF GG+ + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 690 P 692
P
Sbjct: 305 P 305
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 181
+DI LY EL PG+ L G+ Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D++F
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSF 95
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 552 LLLSLPVLAGAITILLTDRNXNTSFFDPAGGGDPXLYQHLF*FFGHP 692
+L+S P+L + + DR +T F+ GG LY +L +GHP
Sbjct: 234 ILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHP 280
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 1 RHERYWNIIFYFWYLIRNNWNIFKTFNS 84
+ + YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,508,980
Number of Sequences: 1657284
Number of extensions: 8949609
Number of successful extensions: 17748
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 17122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17700
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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