Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060836.seq
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   6.9  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   9.1  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 488 NRILXIVVIKLIAPIIDEIPAKCSEKIARSTDLPLCAIL 372
           N IL  V+I  +  ++  +PA+  EK+     + L  ++
Sbjct: 238 NLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVV 276


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 1   RHERYWNIIFYFWYLI 48
           RH++ W+ + Y +YL+
Sbjct: 352 RHKKRWSQVMYMYYLL 367


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 685 PKNQNKC*YXIGSPPPAGSKNDVFXFRSVNN 593
           PK +    Y  G PP   S N +F  + + N
Sbjct: 296 PKTERGAFYVSGQPPVRSSVNMMFLTKELRN 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,683
Number of Sequences: 2352
Number of extensions: 10106
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)