Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060835.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      25   1.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   3.9  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   5.1  

>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +1

Query: 469 STESLFPPPSCV--PMERPHETPFQRRLASLNLGNLSHEIST 588
           STE  F  P     P ERPH  PFQ   A L   + S  + T
Sbjct: 21  STEMTFANPLSPNSPAERPHIQPFQMASAPLVAQSRSAMVQT 62


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 10  EHLNTIGPDDAPLLSLIYTGDGSIGHWAADESP 108
           +H+NT   +D+P  + I T   S G++    +P
Sbjct: 524 QHMNTSSMNDSPSPTTILTSVNSSGNYMCRSNP 556


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
 Frame = +3

Query: 72  WIHRSLGC---RRIPXXXPPFPHSRLG 143
           WI + L     R +P   P FPH  LG
Sbjct: 16  WIRQRLAYWEKRGVPYVPPSFPHGNLG 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,397
Number of Sequences: 2352
Number of extensions: 16876
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)