Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060833.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   1.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   1.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.5  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 191 F*ISNTFKNLNQYIFIVIFDVLLGLAHYGEWAIPFSLVY 307
           F ++N    L    + V+F +LLG+    E+A  +  +Y
Sbjct: 103 FVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLY 141


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 191 F*ISNTFKNLNQYIFIVIFDVLLGLAHYGEWAIPFSLVY 307
           F ++N    L    + V+F +LLG+    E+A  +  +Y
Sbjct: 103 FVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLY 141


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 191 F*ISNTFKNLNQYIFIVIFDVLLGLAHYGEWAIPFSLVY 307
           F ++N    L    + V+F +LLG+    E+A  +  +Y
Sbjct: 423 FVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLY 461


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -2

Query: 379  INNKNTTALFPNEVPHTQTSPHT*IDQGKGDCPLSIVC 266
            I++   T   PNEV   +   H      K DC +  +C
Sbjct: 900  ISSGQYTTKDPNEVTCDEEEGHISYHPDKADCRMYYMC 937


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 241 YYKNVLIQILKCIGY 197
           YYK+V ++ LK +GY
Sbjct: 223 YYKDVDLKALKKLGY 237


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 173 RQFQYIF*ISNTFKNLNQYIFIVIFDVL 256
           R FQY    S T+   N  IF++   VL
Sbjct: 142 RMFQYYIGRSFTYYVCNTTIFLIFHSVL 169


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 361 TALFPNEVPHTQTSPH 314
           T L+P+ VP   TSP+
Sbjct: 320 TELYPSPVPGHSTSPN 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,470
Number of Sequences: 336
Number of extensions: 3276
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)