Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060830.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 245  TGTHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADT 391
            T T + V  Q+F ++  GP ++      AE + +   DK T +   A T
Sbjct: 1068 TYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVPEQPPDKATCTTLTAQT 1116


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 288 WNVGPQRNIGRL 323
           WN GPQ  +G L
Sbjct: 337 WNWGPQEGLGEL 348


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 195 DDFEHLDRETKQDPADSPVHIIAWPLRVS 281
           +DF    +E      DS V   AWP RV+
Sbjct: 259 NDFNEAIKEAYFPKLDSLVSSRAWPSRVA 287


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 11  RQDSPARRTLALASAPHPIDHLF 79
           R D  A +T + +  P P+ H+F
Sbjct: 145 RSDDLAVKTTSKSLVPTPVTHIF 167


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = +3

Query: 309 NIGRLPSPKSLWTTWPTNLPTVSQTPILQESRPSIGPSRGSNSRS 443
           N  ++  P+S  T W   +  + +   + E +   G + GS+  S
Sbjct: 21  NYQQVMEPRSPHTAWQFGVSQIVKREPMDEDKNDSGVTSGSDFHS 65


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 366 PTVSQTPILQESRPSIGPS 422
           PT+S TP  + +RP   PS
Sbjct: 402 PTISTTPRPEWARPPSTPS 420


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 232 TRRIHRYTSS 261
           TRR+HR+T S
Sbjct: 245 TRRLHRFTKS 254


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 232 TRRIHRYTSS 261
           TRR+HR+T S
Sbjct: 245 TRRLHRFTKS 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,978
Number of Sequences: 336
Number of extensions: 2467
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)