Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060828.seq
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    37   1e-04
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.34 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.5  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.2  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +1

Query: 361 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKR 540
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +  R  ++  + 
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204

Query: 541 VPGKNVGLHL 570
             GK     L
Sbjct: 205 GSGKTAAFML 214


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 612 LXIGGWLFMCTIAGKM*ANVFARNPF 535
           L IGGW F  T   ++ +NVF  N F
Sbjct: 594 LAIGGWAFGSTPFKELTSNVFRMNQF 619


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 16  VDPASERIHSLNKHLQLNPKN 78
           VDP SER+    + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 234 GRTCDAQLGFCFTPTFQQKLL*STSYSSQKIT 329
           GR C++++ FC T   Q   + +T ++  K T
Sbjct: 332 GRHCESKVNFCATSPCQNGGVCTTIHAGHKCT 363


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +3

Query: 429 LCATRCKDNGLQRTDAHSSSRLADSYVGKNLVGVPKTGSGQKR 557
           + A    D GL R  A S    AD     N+ G+P   S +K+
Sbjct: 478 ITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQ 520


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 16  VDPASERIHSLNKHLQLNPKN 78
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 16  VDPASERIHSLNKHLQLNPKN 78
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +2

Query: 401 NTLKKQIFLIMCNKV*RQWVTKNRRPFKLKAGR*LCWKEFSWRTQ 535
           ++ +K  F ++ +K+ +    K    +K       CW EF+ +TQ
Sbjct: 202 DSARKPFFKLLTSKIYKVLEEK----YKTSGSLYTCWSEFTQKTQ 242


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 165 GLATVAIDLEDLEALVGKKNSLEGRTCDA 251
           G+   +I+ +DL A  G KN+L     DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 211 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 53
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 211 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 53
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 106 AIIPVTRHDYFSDLVEDVYL 47
           A++PV +H     LV  VYL
Sbjct: 18  ALLPVKKHHRLEKLVPCVYL 37


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 109 TAIIPVTRHDYFSDLVEDVYLNYGFFLT 26
           T  IP    DY  DLV  + +N+   +T
Sbjct: 215 TTEIPPEPEDYVEDLVGHIEVNHSAPIT 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,906
Number of Sequences: 336
Number of extensions: 3455
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)