Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060828.seq
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 100 9e-22
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 90 2e-18
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 72 5e-13
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 69 4e-12
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 68 8e-12
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 66 2e-11
08_01_0397 - 3509186-3510291,3510322-3512335 61 9e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 58 5e-09
02_01_0381 - 2764331-2764342,2768966-2769907 46 3e-05
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 45 7e-05
06_03_1255 + 28780181-28781172,28782065-28782932 44 1e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 43 2e-04
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 40 0.001
03_05_0865 - 28365430-28367640 39 0.003
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 37 0.013
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 36 0.040
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 34 0.093
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 32 0.38
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 31 1.1
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 29 3.5
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 29 3.5
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 3.5
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 28 6.1
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 6.1
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 28 8.1
07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823 28 8.1
02_03_0219 + 16541350-16541482,16541605-16541765,16541863-165419... 28 8.1
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 100 bits (240), Expect = 9e-22
Identities = 46/103 (44%), Positives = 63/103 (61%)
Frame = +1
Query: 250 PSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 429
P D SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 430 YVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNV 558
Y Q + G+ EPTPIQ+QGWP+A+ R + + GK +
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTL 208
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIAWV 637
KTL+Y+LP +VH+ QP + + DGPI +
Sbjct: 206 KTLSYLLPGLVHVGAQPRLEQGDGPIVLI 234
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/108 (39%), Positives = 62/108 (57%)
Frame = +1
Query: 235 AEHATPSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE 414
A+ A + D L F KNFY P+V + EVE YR + E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 415 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNV 558
FP+YV Q + G+ EPTPIQ+QGWP+A+ R + + GK +
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTL 143
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIAWV 637
KTLAY+LPAIVH+N QP + DGPI V
Sbjct: 141 KTLAYLLPAIVHVNAQPILAPGDGPIVLV 169
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/103 (33%), Positives = 52/103 (50%)
Frame = +1
Query: 262 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 441
++ +PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 442 GVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
+ GY++PT IQ Q PI + R + K GK L
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVL 275
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIAWV 637
KT A++LP IVHI +QP + + +GPI V
Sbjct: 269 KTAAFVLPMIVHIMDQPELEKEEGPIGVV 297
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ R
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 520 *LAYPKRVPGKNVG 561
+A K GK +G
Sbjct: 220 IVAVAKTGSGKTLG 233
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 67.7 bits (158), Expect = 8e-12
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 520 *LAYPKRVPGKNVG 561
+A K GK +G
Sbjct: 190 VVAIAKTGSGKTLG 203
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +1
Query: 241 HATPSWDSVSLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEA 417
H + S++P ++ F P+ P++ + YR HEVT G V P FE
Sbjct: 555 HNHGPFPEASMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEAT 609
Query: 418 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVG 561
FP + Q + G+ PTPIQAQ WP+A+ R +A K GK +G
Sbjct: 610 GFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLG 657
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/102 (32%), Positives = 51/102 (50%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ QPF KNFY + K + EV YR + E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 445 VKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
+K +G+++P IQAQ PI M R + K GK + L
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVL 480
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIAWV 637
KTLA++LP + H+ +QP + DGPI +
Sbjct: 474 KTLAFVLPMLRHVKDQPAVVPGDGPIGLI 502
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/102 (31%), Positives = 49/102 (48%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ QPF KN Y + + EV YR E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 445 VKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
+K +G+++P PIQAQ PI M R + K GK + L
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVL 341
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIAWV 637
KTLA++LP + H+ +QPP+ DGPI +
Sbjct: 335 KTLAFVLPMLRHVKDQPPVVPGDGPIGLI 363
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 483
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 484 AQGWPIAMLER 516
QG P+ + R
Sbjct: 210 VQGLPVVLSGR 220
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 334 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLE 513
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 514 RI*LAYPKRVPGKNVG--LHLASNCAH 588
R L GK + + ++C+H
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSH 246
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 483
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 484 AQGWPIAMLER 516
QG P+A+ R
Sbjct: 201 VQGLPVALSGR 211
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRV 543
V VSG +V P FE A + V + V GY+ PTP+Q PIA+ R +A +
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 544 PGKNVGLHL 570
GK L
Sbjct: 132 SGKTAAFCL 140
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 349 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI + R
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
>03_05_0865 - 28365430-28367640
Length = 736
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 346 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*L 525
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + +R +
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 526 AYPKRVPGKNVGLHL 570
+ GK L
Sbjct: 357 GIAETGSGKTAAFVL 371
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRV 543
V SG +V P+ F E + D + + ++ Y +PTP+Q PI++ R +A +
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 544 PGK 552
GK
Sbjct: 285 SGK 287
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRV 543
V SG +V P F E + D + + ++ Y +PTP+Q PI++ R +A +
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 544 PGK 552
GK
Sbjct: 371 SGK 373
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 34.3 bits (75), Expect = 0.093
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRV 543
V SG EV P+ F E + + ++ Y PTP+Q PI++ R +A +
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 544 PGK 552
GK
Sbjct: 203 SGK 205
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 507
FE + V +GV+ GY+ PTPIQ + P+ +
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLIL 61
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
F E N + + + +GY++PTPIQA P+A+ R
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGK 552
FE+ + G+ G++ P+PIQ + PIA+ LA K GK
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 197
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGK 552
FE+ + G+ G++ P+PIQ + PIA+ LA K GK
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 174
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGK 552
FE+ + G+ G++ P+PIQ + PIA+ LA K GK
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 184
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 445 VKTMGYKEPTPIQAQGWPIA 504
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 325 SPYEVEEYRNKHEVTVSGVEVHN 393
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 498
P+ F P V K G++ P+PIQA WP
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWP 124
>07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823
Length = 130
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 277 VGVKQNPNWASHVLPSREF 221
VGVK+ +W + +LPSR+F
Sbjct: 81 VGVKEIESWTARLLPSRQF 99
>02_03_0219 +
16541350-16541482,16541605-16541765,16541863-16541940,
16543176-16543445
Length = 213
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 277 VGVKQNPNWASHVLPSREF 221
VGVK+ +W + +LPSR+F
Sbjct: 81 VGVKEIESWTARLLPSRQF 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,671,024
Number of Sequences: 37544
Number of extensions: 363792
Number of successful extensions: 948
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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