Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060828.seq
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 42 3e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 42 3e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 42 3e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 41 0.001
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 34 0.11
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.34
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.34
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 32 0.34
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.8
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.4
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 29 2.4
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 29 3.2
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 29 3.2
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.2
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 28 5.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 28 5.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.3
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 7.3
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 7.3
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 7.3
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 7.3
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 27 9.6
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 27 9.6
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 27 9.6
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 27 9.6
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 27 9.6
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 27 9.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/105 (31%), Positives = 57/105 (54%)
Frame = +1
Query: 256 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYV 435
W + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 436 QQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
+ + +++PT IQ+ WPIAM R ++ K GK + L
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFML 185
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIAWV 637
KTLA++LPA+VHI Q R +GP V
Sbjct: 179 KTLAFMLPALVHITKQAHRQRGEGPAVLV 207
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/75 (38%), Positives = 40/75 (53%)
Frame = +1
Query: 346 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*L 525
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 526 AYPKRVPGKNVGLHL 570
+ GK L
Sbjct: 343 GVAETGSGKTAAFLL 357
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/96 (30%), Positives = 47/96 (48%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 445 VKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGK 552
++ Y++PTPIQA P A+ R L K GK
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGK 315
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIA 631
KT AY+ PAIVHI +QP + +GP+A
Sbjct: 315 KTAAYLWPAIVHIMDQPDLKAGEGPVA 341
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 441
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 442 GVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
+K Y +PT IQAQ P M R + K GK + L
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLL 360
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 551 KTLAYILPAIVHINNQPPIXRXDGPIA 631
KTLA++LP HI +QP + DGPIA
Sbjct: 354 KTLAFLLPMFRHILDQPELEEGDGPIA 380
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
++Y N V VSG V I++F EA F V + V GY +PTP+Q P + R
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 520 *LAYPKRVPGKNVGLHL 570
++ + GK L
Sbjct: 179 LMSCAQTGSGKTAAFLL 195
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
++Y N V VSG V I++F EA F V + V GY +PTP+Q P + R
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 520 *LAYPKRVPGKNVGLHL 570
++ + GK L
Sbjct: 163 LMSCAQTGSGKTAAFLL 179
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
++Y N V VSG V I++F EA F V + V GY +PTP+Q P + R
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 520 *LAYPKRVPGKNVGLHL 570
++ + GK L
Sbjct: 160 LMSCAQTGSGKTAAFLL 176
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 498
V +G +V PI F + + +++++ +KT GY PTP+Q P
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIP 198
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 373 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAM 507
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLL 119
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 22 PASERIHSLNKHLQLNPKNNHVW 90
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 108 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 224
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 424 PDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
P+ V + ++ MG+ EPT IQ+ P A+ +R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 507
FE+ N + + GY +PTPIQ P+A+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVAL 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
P + F +++ P +++ V+ GY TPIQ P+ + LA + GK L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNVGLHL 570
P + F +++ P +++ V+ GY TPIQ P+ + LA + GK L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 163 RRIIAEFVASSKFGTTVSTAIIPV 92
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 163 RRIIAEFVASSKFGTTVSTAIIPV 92
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 444 CKDNGLQRTDAHSSSRLADSYVGKNLVGVPKT 539
C+D G Q SR+AD Y GK +G+ +T
Sbjct: 191 CEDCGAQLNITDHESRIADHYNGKMHIGMVET 222
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -1
Query: 513 FQHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 337
++ +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -1
Query: 513 FQHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 337
++ +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 301 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 459
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 301 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 459
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 280 KVGVKQNPNWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 101
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 100 IPVTRHDYFSDLVEDVYLNYGFFLTQ 23
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 280 KVGVKQNPNWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 101
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 100 IPVTRHDYFSDLVEDVYLNYGFFLTQ 23
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 280 KVGVKQNPNWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 101
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 100 IPVTRHDYFSDLVEDVYLNYGFFLTQ 23
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 280 KVGVKQNPNWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 101
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 100 IPVTRHDYFSDLVEDVYLNYGFFLTQ 23
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNV 558
FE + +K + P+P+QA+ P+ +L R L K GK +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYPKRVPGKNV 558
FE + +K + P+P+QA+ P+ +L R L K GK +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 447 KDNGLQRTDAHSSSRLADSYVGKNLVGVPKTGSGQ 551
KDN + +A S G ++VG KTGSG+
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGK 126
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,173,281
Number of Sequences: 27780
Number of extensions: 324508
Number of successful extensions: 975
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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