Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060822.seq
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    26   0.26 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    26   0.26 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 196 KLQVNLKKTQQQFSLRNKTHFC 261
           KL  NLK  Q   ++R K+H+C
Sbjct: 95  KLLKNLKMVQNHNNIREKSHYC 116


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 196 KLQVNLKKTQQQFSLRNKTHFC 261
           KL  NLK  Q   ++R K+H+C
Sbjct: 95  KLLKNLKMVQNHNNIREKSHYC 116


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +2

Query: 5  TRRCRQKINLIYLTV 49
          T+RC++K+N + ++V
Sbjct: 11 TQRCKEKLNTLAISV 25


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 644 SHQQSLVHQMLLPC 603
           +HQ+S++   +LPC
Sbjct: 318 AHQESIIMNNILPC 331


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/48 (20%), Positives = 18/48 (37%)
 Frame = +3

Query: 111 KFAMCIALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNT 254
           K+ +  A+     G+      PVP  + +   KP        P++  T
Sbjct: 371 KYPILKAIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLT 418


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 171 VPVPHDIPQAPGKPEENATAVQPTKQNT 254
           VP P   P    + E    + QPT+ +T
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESST 423


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,091
Number of Sequences: 336
Number of extensions: 2504
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)