Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060822.seq
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.        23   7.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.2  

>EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 181 GTGTVVPSWAPDCSAGNAMHMANFSKQT 98
           G+GT+  +  PD S G+A     + KQ+
Sbjct: 30  GSGTIGTNGGPDLSFGDADFSVQYFKQS 57


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 13  LSTENKSHLFNC 48
           LS ENK H+F+C
Sbjct: 941 LSLENKPHVFDC 952


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 537 CDHSEIRTCQIY*SPHTHGTNCTGQEH 617
           CD+ +  T   + SP    T+CTG++H
Sbjct: 6   CDYCD--TYLTHDSPSVRKTHCTGRKH 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,411
Number of Sequences: 2352
Number of extensions: 11249
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)