Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060821.seq
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D16373-1|BAA03871.1|  453|Homo sapiens mitochondrial dihydrolipo...    45   2e-04
L37418-1|AAB59629.1|  453|Homo sapiens dihydrolipoamide succinyl...    45   3e-04
D26535-1|BAA05536.1|  453|Homo sapiens dihydrolipoamide succinyl...    45   3e-04
CR456727-1|CAG33008.1|  453|Homo sapiens DLST protein.                 45   3e-04
BC001922-1|AAH01922.1|  453|Homo sapiens dihydrolipoamide S-succ...    45   3e-04
BC000302-1|AAH00302.1|  453|Homo sapiens dihydrolipoamide S-succ...    45   3e-04
AC006530-2|AAD30181.1|  453|Homo sapiens alpha-KG-E2 protein.          45   3e-04
S72422-1|AAB31066.1|  451|Homo sapiens alpha-ketoglutarate dehyd...    44   3e-04
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  30   7.8  

>D16373-1|BAA03871.1|  453|Homo sapiens mitochondrial
           dihydrolipoamide succinyltransferase protein.
          Length = 453

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGTKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>L37418-1|AAB59629.1|  453|Homo sapiens dihydrolipoamide
           succinyltransferase protein.
          Length = 453

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>D26535-1|BAA05536.1|  453|Homo sapiens dihydrolipoamide
           succinyltransferase protein.
          Length = 453

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>CR456727-1|CAG33008.1|  453|Homo sapiens DLST protein.
          Length = 453

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>BC001922-1|AAH01922.1|  453|Homo sapiens dihydrolipoamide
           S-succinyltransferase (E2 component of 2-oxo-glutarate
           complex protein.
          Length = 453

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>BC000302-1|AAH00302.1|  453|Homo sapiens dihydrolipoamide
           S-succinyltransferase (E2 component of 2-oxo-glutarate
           complex protein.
          Length = 453

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>AC006530-2|AAD30181.1|  453|Homo sapiens alpha-KG-E2 protein.
          Length = 453

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT++ V +P +GVI+ L V DG  V+
Sbjct: 100 DEVVCEIETDKTSVQVPSPANGVIEALLVPDGGKVE 135



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V +D    V TP+F +SV+EGDV+ +K VGD+V
Sbjct: 48  VVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTV 97


>S72422-1|AAB31066.1|  451|Homo sapiens alpha-ketoglutarate
           dehydrogenase complex dihydrolipoyl succinyltransferase
           protein.
          Length = 451

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = +1

Query: 403 DEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
           DEVV EIETDKT + V +P +G+I+ L+V DG  V+
Sbjct: 99  DEVVCEIETDKTLVQVPSPANGMIEALFVPDGGKVE 134



 Score = 36.3 bits (80), Expect = 0.090
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = +2

Query: 260 LVAHNQVASIHFTNPLLV-EQD---VTTPSFPDSVSEGDVKLDKKVGDSV 397
           +V +N V S+ F     V + D   V TP+F + V+EGDV+ +K VGD+V
Sbjct: 47  VVINNSVFSVRFFRTTTVCKYDLVTVKTPAFAEPVTEGDVRWEKAVGDTV 96


>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 175 ASPSASSQQLKRPKYLHPYTQPN*TNRSSGRPQSSSIHPLHESP 306
           ASP   +  L RP    P + P   +  S  P+SS   PL ESP
Sbjct: 476 ASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESP 519


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,708,077
Number of Sequences: 237096
Number of extensions: 1961916
Number of successful extensions: 4759
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4759
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)