Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060821.seq
(630 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003564-1|AAO39568.1| 468|Drosophila melanogaster LP03989p pro... 50 3e-06
AY089515-1|AAL90253.1| 468|Drosophila melanogaster GM01350p pro... 50 3e-06
AE014297-1281|AAF54625.1| 468|Drosophila melanogaster CG5214-PA... 50 3e-06
Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor pr... 31 0.97
X76217-1|CAA53807.1| 779|Drosophila melanogaster a box binding ... 31 0.97
DQ239724-1|ABB76244.1| 217|Drosophila melanogaster kl-2 protein... 30 3.0
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei... 30 3.0
>BT003564-1|AAO39568.1| 468|Drosophila melanogaster LP03989p
protein.
Length = 468
Score = 50.0 bits (114), Expect = 3e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 400 ADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
ADE V+EIETDKT + V AP G + ++ VKDG+TVK
Sbjct: 105 ADEAVMEIETDKTTVAVPAPFSGTLTDILVKDGDTVK 141
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 287 IHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDS 394
IH T+ L EQ V P F DS++EGD+K KVGDS
Sbjct: 67 IHTTSSLWSEQTVNVPPFADSIAEGDIKFTCKVGDS 102
>AY089515-1|AAL90253.1| 468|Drosophila melanogaster GM01350p
protein.
Length = 468
Score = 50.0 bits (114), Expect = 3e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 400 ADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
ADE V+EIETDKT + V AP G + ++ VKDG+TVK
Sbjct: 105 ADEAVMEIETDKTTVAVPAPFSGTLTDILVKDGDTVK 141
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 287 IHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDS 394
IH T+ L EQ V P F DS++EGD+K KVGDS
Sbjct: 67 IHTTSSLWSEQTVNVPPFADSIAEGDIKFTCKVGDS 102
>AE014297-1281|AAF54625.1| 468|Drosophila melanogaster CG5214-PA
protein.
Length = 468
Score = 50.0 bits (114), Expect = 3e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 400 ADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVK 510
ADE V+EIETDKT + V AP G + ++ VKDG+TVK
Sbjct: 105 ADEAVMEIETDKTTVAVPAPFSGTLTDILVKDGDTVK 141
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 287 IHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDS 394
IH T+ L EQ V P F DS++EGD+K KVGDS
Sbjct: 67 IHTTSSLWSEQTVNVPPFADSIAEGDIKFTCKVGDS 102
>Y07662-1|CAA68943.1| 949|Drosophila melanogaster GATA factor
protein.
Length = 949
Score = 31.5 bits (68), Expect = 0.97
Identities = 27/102 (26%), Positives = 40/102 (39%)
Frame = +2
Query: 53 WAVKSIITTKRQRQNKR*VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLT 232
W + TTK +R + S + A + AHP + P H L NN+N N +L
Sbjct: 662 WTCRPTQTTKCRRSTCSSISSSNRAACSTHPAHPLHLQHPSPTHQLHNNNNN--NNSSLF 719
Query: 233 RNQTEPTGALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSE 358
N + N I L Q +++ S DS S+
Sbjct: 720 NNNNNNNNSSSNENNNKLI---QKYLQAQQLSSSSNSDSTSD 758
>X76217-1|CAA53807.1| 779|Drosophila melanogaster a box binding
factor (ABF), alsocalled dGATA-b protein.
Length = 779
Score = 31.5 bits (68), Expect = 0.97
Identities = 27/102 (26%), Positives = 40/102 (39%)
Frame = +2
Query: 53 WAVKSIITTKRQRQNKR*VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLT 232
W + TTK +R + S + A + AHP + P H L NN+N N +L
Sbjct: 492 WTCRPTQTTKCRRSTCSSISSSNRAACSTHPAHPLHLQHPSPTHQLHNNNNN--NNSSLF 549
Query: 233 RNQTEPTGALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSE 358
N + N I L Q +++ S DS S+
Sbjct: 550 NNNNNNNNSSSNENNNKLI---QKYLQAQQLSSSSNSDSTSD 588
>DQ239724-1|ABB76244.1| 217|Drosophila melanogaster kl-2 protein
protein.
Length = 217
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = +2
Query: 164 PASGPVHPLQVNNSNAQNTCTLTRNQTEPTGALVAHNQVASIHFTNPLLVEQDVTTPSFP 343
P + VH ++ N N ++ + RN G H + SIH T +L
Sbjct: 45 PRNQLVHE-RIQNINEYHSYAVYRNTCR--GLFERHKLLFSIHMTAKILSNAGKLLEEEY 101
Query: 344 DSVSEGDVKLDKKVGDSVXPMKWSWKSRR 430
D + +G + LD K+G + P W W S +
Sbjct: 102 DFILKGGIVLD-KLGQAPNPAPW-WISEQ 128
>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
protein.
Length = 4167
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = +2
Query: 164 PASGPVHPLQVNNSNAQNTCTLTRNQTEPTGALVAHNQVASIHFTNPLLVEQDVTTPSFP 343
P + VH ++ N N ++ + RN G H + SIH T +L
Sbjct: 3394 PRNQLVHE-RIQNINEYHSYAVYRNTCR--GLFERHKLLFSIHMTAKILSNAGKLLEEEY 3450
Query: 344 DSVSEGDVKLDKKVGDSVXPMKWSWKSRR 430
D + +G + LD K+G + P W W S +
Sbjct: 3451 DFILKGGIVLD-KLGQAPNPAPW-WISEQ 3477
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,239,079
Number of Sequences: 53049
Number of extensions: 590560
Number of successful extensions: 1758
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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