Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060818.seq
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +1

Query: 64  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSK 240
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A  S+
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESE 712


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 193 KVYSGDGASLSAPGSKRSALSLRTPSVSR 279
           +++    +SL    S++SA   RTP +SR
Sbjct: 229 EIWQSSESSLRPRSSQKSAPGKRTPLISR 257


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
 Frame = -3

Query: 523 VHNLLCSCSCC----GDAWPSWRLSALLAKELELD 431
           +H+L      C    GD W SW     + +EL LD
Sbjct: 366 IHHLARHAVACFLTRGDLWLSWEEGMKVFEELLLD 400


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 294 RRPGTARNTRRPKRQS 247
           +R GT     RPKRQS
Sbjct: 244 QRTGTELTKMRPKRQS 259


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 256  ATELSVCCRERSE 218
            +TEL++CC ++ E
Sbjct: 1359 STELNLCCTKKKE 1371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 256  ATELSVCCRERSE 218
            +TEL++CC ++ E
Sbjct: 1359 STELNLCCTKKKE 1371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 256  ATELSVCCRERSE 218
            +TEL++CC ++ E
Sbjct: 1359 STELNLCCTKKKE 1371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 256  ATELSVCCRERSE 218
            +TEL++CC ++ E
Sbjct: 1359 STELNLCCTKKKE 1371


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 521 NKILERKDKHPVKIEFKIYL 580
           ++ L  K   PVKI  K+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 521 NKILERKDKHPVKIEFKIYL 580
           ++ L  K   PVKI  K+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,642
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)