Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060818.seq
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 31 2.8
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 31 2.8
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 31 2.8
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 31 2.8
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 31 2.8
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 31 2.8
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 31 2.8
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 31 2.8
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 31 2.8
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 31 2.8
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 30 6.4
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 30 6.4
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 30 6.4
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 30 6.4
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 30 6.4
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 30 6.4
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 30 6.4
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 30 6.4
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 30 6.4
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein. 30 6.4
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 30 6.4
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 8.5
BC027865-1|AAH27865.1| 404|Homo sapiens C11orf16 protein protein. 30 8.5
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 8.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 8.5
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 8.5
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 8.5
AK223377-1|BAD97097.1| 467|Homo sapiens chromosome 11 open read... 30 8.5
AJ400877-5|CAB92289.1| 467|Homo sapiens C11orf16 protein protein. 30 8.5
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.5
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.5
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 122 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 153
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 274 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 305
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 763 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 794
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 284 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 379
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 877 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 933
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 740 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 796
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 192 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 248
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1844 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1900
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1565 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1621
>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
Length = 1089
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 307 HHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRSP 164
H R P EK S +E+ E S ++R + R +NK S P S R P
Sbjct: 274 HKRKPKADTEEKSSKAESGEKS---KKRKKRKRKKNKSSAPADSERGP 318
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRERSETPRHRNKPSRPVWSRRS 167
R+V ++ HR + K S+S +V R RS TP R++ P RRS
Sbjct: 1890 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1946
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSHSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>BC027865-1|AAH27865.1| 404|Homo sapiens C11orf16 protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 532 QDLVHNLLCSCSCCGDA-WPSWRLSALLAKEL-ELDHSRAL 416
Q L LC C CG WP R S ++A+EL EL+ + L
Sbjct: 275 QLLCQGCLCGCPPCGTTWWPLTRTSEVMARELPELEATAQL 315
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AK223377-1|BAD97097.1| 467|Homo sapiens chromosome 11 open reading
frame 16 variant protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 532 QDLVHNLLCSCSCCGDA-WPSWRLSALLAKEL-ELDHSRAL 416
Q L LC C CG WP R S ++A+EL EL+ + L
Sbjct: 275 QLLCQGCLCGCPPCGTTWWPLTRTSEVMARELPELEATAQL 315
>AJ400877-5|CAB92289.1| 467|Homo sapiens C11orf16 protein protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 532 QDLVHNLLCSCSCCGDA-WPSWRLSALLAKEL-ELDHSRAL 416
Q L LC C CG WP R S ++A+EL EL+ + L
Sbjct: 275 QLLCQGCLCGCPPCGTTWWPLTRTSEVMARELPELEPTAQL 315
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 343 RAVQSREQGHQDHHRGPAPRHSEKHSASEATELSVCCRER----SETPRHRNKPSRP 185
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,258,995
Number of Sequences: 237096
Number of extensions: 1819951
Number of successful extensions: 5609
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5602
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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