Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060816.seq
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synth...    23   5.7  
AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical prote...    23   10.0 
AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosens...    23   10.0 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   10.0 

>AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synthase
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 167 QQWDMILSDKCDCK 126
           Q+WD I S+  DCK
Sbjct: 8   QEWDHIKSEMVDCK 21


>AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical protein
           protein.
          Length = 117

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 488 QVKTAAYVVLAR-CQNCVAC*AGNAQRESN 402
           Q+K A   V+ R C+NC    A NAQ+ +N
Sbjct: 68  QLKAALPEVIQRNCRNCSPQQAQNAQKLTN 97


>AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosensory
           protein CSP4 protein.
          Length = 117

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 488 QVKTAAYVVLAR-CQNCVAC*AGNAQRESN 402
           Q+K A   V+ R C+NC    A NAQ+ +N
Sbjct: 68  QLKAALPEVIQRNCRNCSPQQAQNAQKLTN 97


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +2

Query: 215 VIQKTSTASHCITSTLAGPTSLDISAGTGLSTFHTR 322
           VI    T SH     LAG   L +       TFH R
Sbjct: 797 VISSFRTTSHDAVCVLAGMIPLHLLLDEDSRTFHRR 832


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,680
Number of Sequences: 2352
Number of extensions: 12678
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)