Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060816.seq
(599 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 37 0.047
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 37 0.047
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 37 0.047
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 37 0.047
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 37 0.047
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 37 0.047
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 37 0.047
BC119661-1|AAI19662.2| 313|Homo sapiens CRYL1 protein protein. 30 5.4
BC119660-1|AAI19661.2| 313|Homo sapiens CRYL1 protein protein. 30 5.4
BC071810-1|AAH71810.1| 297|Homo sapiens CRYL1 protein protein. 30 5.4
BC008562-1|AAH08562.2| 306|Homo sapiens CRYL1 protein protein. 30 5.4
AL590096-2|CAI14389.1| 319|Homo sapiens crystallin, lambda 1 pr... 30 5.4
AL590096-1|CAI14388.1| 297|Homo sapiens crystallin, lambda 1 pr... 30 5.4
AL161715-2|CAH71074.1| 319|Homo sapiens crystallin, lambda 1 pr... 30 5.4
AL161715-1|CAH71073.1| 297|Homo sapiens crystallin, lambda 1 pr... 30 5.4
AF160216-1|AAF67017.1| 297|Homo sapiens lambda-crystallin protein. 30 5.4
AF087898-1|AAP97197.1| 319|Homo sapiens lambda-crystallin protein. 30 5.4
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 37.1 bits (82), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 140 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTST 235
+HLG CP F++N+ LG WY I+K T
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54
>BC119661-1|AAI19662.2| 313|Homo sapiens CRYL1 protein protein.
Length = 313
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 162 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 216
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 217 VMSEGLGMRYAFIGPLET 234
>BC119660-1|AAI19661.2| 313|Homo sapiens CRYL1 protein protein.
Length = 313
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 162 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 216
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 217 VMSEGLGMRYAFIGPLET 234
>BC071810-1|AAH71810.1| 297|Homo sapiens CRYL1 protein protein.
Length = 297
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 146 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 200
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 201 VMSEGLGMRYAFIGPLET 218
>BC008562-1|AAH08562.2| 306|Homo sapiens CRYL1 protein protein.
Length = 306
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 155 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 209
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 210 VMSEGLGMRYAFIGPLET 227
>AL590096-2|CAI14389.1| 319|Homo sapiens crystallin, lambda 1
protein.
Length = 319
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 168 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 222
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 223 VMSEGLGMRYAFIGPLET 240
>AL590096-1|CAI14388.1| 297|Homo sapiens crystallin, lambda 1
protein.
Length = 297
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 146 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 200
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 201 VMSEGLGMRYAFIGPLET 218
>AL161715-2|CAH71074.1| 319|Homo sapiens crystallin, lambda 1
protein.
Length = 319
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 168 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 222
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 223 VMSEGLGMRYAFIGPLET 240
>AL161715-1|CAH71073.1| 297|Homo sapiens crystallin, lambda 1
protein.
Length = 297
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 146 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 200
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 201 VMSEGLGMRYAFIGPLET 218
>AF160216-1|AAF67017.1| 297|Homo sapiens lambda-crystallin protein.
Length = 297
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 146 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 200
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 201 VMSEGLGMRYAFIGPLET 218
>AF087898-1|AAP97197.1| 319|Homo sapiens lambda-crystallin protein.
Length = 319
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 113 TVTYVYSHTYHLGSCP--IVEPMSGFEMNRLLGVWYVIQKTSTASHCITSTLAGPTSLDI 286
TV ++ +G CP + + ++GF +NRL Y I S A + + P+ LD+
Sbjct: 168 TVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQ---YAI--ISEAWRLVEEGIVSPSDLDL 222
Query: 287 SAGTGLSTFHTRIDALET 340
GL + I LET
Sbjct: 223 VMSEGLGMRYAFIGPLET 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,202,197
Number of Sequences: 237096
Number of extensions: 1804495
Number of successful extensions: 3420
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3419
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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