Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060816.seq
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070838-1|AAL48460.2|  227|Drosophila melanogaster GH09946p pro...    40   0.003
AE013599-1646|AAF58418.1|  212|Drosophila melanogaster CG4604-PA...    40   0.003
AF276506-1|AAF85708.1|  212|Drosophila melanogaster glial Lazari...    38   0.010
AY061609-1|AAL29157.1|  266|Drosophila melanogaster SD07475p pro...    30   2.8  
AY038185-1|AAK72697.1|  266|Drosophila melanogaster Karl protein.      30   2.8  
AE014298-1682|AAN09297.1|  266|Drosophila melanogaster CG4139-PB...    30   2.8  
AE014298-1681|AAF48091.2|  266|Drosophila melanogaster CG4139-PA...    30   2.8  
AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p pro...    28   8.4  
AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural Lazar...    28   8.4  
AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA...    28   8.4  

>AY070838-1|AAL48460.2|  227|Drosophila melanogaster GH09946p
           protein.
          Length = 227

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +2

Query: 74  NKMWKLTVLGVFLTVTYVYSHTYHLGSCPIVEPMSGFEMNRLLGVWYVIQKT----STAS 241
           +++W L+  GV L VT+  +  Y  G CP    M  F M+R+LG WY ++++      AS
Sbjct: 24  SRVWLLS--GVLL-VTFAGTDAYGFGRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIAS 80

Query: 242 HCIT 253
            C T
Sbjct: 81  GCTT 84


>AE013599-1646|AAF58418.1|  212|Drosophila melanogaster CG4604-PA
           protein.
          Length = 212

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +2

Query: 74  NKMWKLTVLGVFLTVTYVYSHTYHLGSCPIVEPMSGFEMNRLLGVWYVIQKT----STAS 241
           +++W L+  GV L VT+  +  Y  G CP    M  F M+R+LG WY ++++      AS
Sbjct: 9   SRVWLLS--GVLL-VTFAGTDAYGFGRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIAS 65

Query: 242 HCIT 253
            C T
Sbjct: 66  GCTT 69


>AF276506-1|AAF85708.1|  212|Drosophila melanogaster glial Lazarillo
           protein.
          Length = 212

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +2

Query: 74  NKMWKLTVLGVFLTVTYVYSHTYHLGSCPIVEPMSGFEMNRLLGVWYVIQKT----STAS 241
           +++W L+  GV L VT   +  Y  G CP    M  F M+R+LG WY ++++      AS
Sbjct: 9   SRVWLLS--GVLL-VTSAGTDAYGFGRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIAS 65

Query: 242 HCIT 253
            C T
Sbjct: 66  GCTT 69


>AY061609-1|AAL29157.1|  266|Drosophila melanogaster SD07475p
           protein.
          Length = 266

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 155 CPIVEPMSGFEMNRLLGVWYVIQ 223
           CP V  +  F++ R++G W+V+Q
Sbjct: 53  CPKVGAIKNFDLERMMGCWHVVQ 75


>AY038185-1|AAK72697.1|  266|Drosophila melanogaster Karl protein.
          Length = 266

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 155 CPIVEPMSGFEMNRLLGVWYVIQ 223
           CP V  +  F++ R++G W+V+Q
Sbjct: 53  CPKVGAIKNFDLERMMGCWHVVQ 75


>AE014298-1682|AAN09297.1|  266|Drosophila melanogaster CG4139-PB,
           isoform B protein.
          Length = 266

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 155 CPIVEPMSGFEMNRLLGVWYVIQ 223
           CP V  +  F++ R++G W+V+Q
Sbjct: 53  CPKVGAIKNFDLERMMGCWHVVQ 75


>AE014298-1681|AAF48091.2|  266|Drosophila melanogaster CG4139-PA,
           isoform A protein.
          Length = 266

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 155 CPIVEPMSGFEMNRLLGVWYVIQ 223
           CP V  +  F++ R++G W+V+Q
Sbjct: 53  CPKVGAIKNFDLERMMGCWHVVQ 75


>AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p
           protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 89  LTVLGVFLTVTYVYSHTYHLGSCPIVEPMSGFEMNRLLGVWY 214
           L +  VF  V   ++     G CP V+ +  F+    +GVWY
Sbjct: 11  LLISVVFGAVWVAHAQVPFPGKCPDVKLLDTFDAEAYMGVWY 52


>AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural
           Lazarillo protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 89  LTVLGVFLTVTYVYSHTYHLGSCPIVEPMSGFEMNRLLGVWY 214
           L +  VF  V   ++     G CP V+ +  F+    +GVWY
Sbjct: 11  LLISVVFGAVWVAHAQVPFPGKCPDVKLLDTFDAEAYMGVWY 52


>AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA
           protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 89  LTVLGVFLTVTYVYSHTYHLGSCPIVEPMSGFEMNRLLGVWY 214
           L +  VF  V   ++     G CP V+ +  F+    +GVWY
Sbjct: 11  LLISVVFGAVWVAHAQVPFPGKCPDVKLLDTFDAEAYMGVWY 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,750,361
Number of Sequences: 53049
Number of extensions: 559012
Number of successful extensions: 1758
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)