Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060815.seq
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 92 3e-19
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 92 3e-19
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 92 4e-19
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 92 4e-19
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 89 3e-18
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 38 0.006
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 35 0.059
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 35 0.059
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 32 0.31
CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical... 31 0.55
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 31 0.72
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 31 0.72
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 31 0.72
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 31 0.96
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 29 2.2
AF003389-2|AAC71132.1| 321|Caenorhabditis elegans Hypothetical ... 29 2.2
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr... 28 6.8
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 27 8.9
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 27 8.9
AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein. 27 8.9
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 27 8.9
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +2
Query: 290 GRVSSARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 469
G VS++ + KT VAP V K+LLQVQ+ K I AD+RY GI+DAFVR+PKEQG +SFW
Sbjct: 28 GGVSAS--VSKTVVAPIERV-KILLQVQYSHKDIPADKRYNGIIDAFVRVPKEQGFVSFW 84
Query: 470 RGNFANVIRYFP 505
RGN NVIRYFP
Sbjct: 85 RGNMTNVIRYFP 96
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKK 573
P QA NFAF D YK + L + ++
Sbjct: 96 PTQAFNFAFNDLYKSILLKNMKRE 119
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 401 QRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 502
+ YKG+VD ++ K +G + +RG ++ YF
Sbjct: 164 REYKGLVDCTMKTVKNEGFSALYRGFAISLQTYF 197
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/68 (64%), Positives = 52/68 (76%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQVQ SK IA D+RYKGI+D +R+PKEQG+ + WRGN
Sbjct: 21 TAAAVSKTAVAPIERV-KLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 482 ANVIRYFP 505
ANVIRYFP
Sbjct: 80 ANVIRYFP 87
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKKTQFW 585
P QA+NFAFKD YK +FL G+DKK FW
Sbjct: 87 PTQAMNFAFKDTYKAIFLEGLDKKKDFW 114
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/68 (64%), Positives = 52/68 (76%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQVQ SK IA D+RYKGI+D +R+PKEQG+ + WRGN
Sbjct: 21 TAAAVSKTAVAPIERV-KLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 482 ANVIRYFP 505
ANVIRYFP
Sbjct: 80 ANVIRYFP 87
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/68 (64%), Positives = 52/68 (76%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQVQ SK IA D+RYKGI+D +R+PKEQG+ + WRGN
Sbjct: 21 TAAAVSKTAVAPIERV-KLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 482 ANVIRYFP 505
ANVIRYFP
Sbjct: 80 ANVIRYFP 87
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKKTQFW 585
P QA+NFAFKD YK +FL G+DKK FW
Sbjct: 87 PTQAMNFAFKDTYKAIFLEGLDKKKDFW 114
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 392 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 490
A D+ +KG+ D ++I K G + +RG F +V
Sbjct: 152 ANDREFKGLADCLIKIVKSDGPIGLYRGFFVSV 184
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/68 (64%), Positives = 52/68 (76%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQVQ SK IA D+RYKGI+D +R+PKEQG+ + WRGN
Sbjct: 21 TAAAVSKTAVAPIERV-KLLLQVQDASKAIAVDKRYKGIMDVLIRVPKEQGVAALWRGNL 79
Query: 482 ANVIRYFP 505
ANVIRYFP
Sbjct: 80 ANVIRYFP 87
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKKTQFW 585
P QA+NFAFKD YK +FL G+DKK FW
Sbjct: 87 PTQAMNFAFKDTYKAIFLEGLDKKKDFW 114
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 392 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 490
A D+ +KG+ D ++I K G + +RG F +V
Sbjct: 152 ANDREFKGLADCLIKIVKSDGPIGLYRGFFVSV 184
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/68 (67%), Positives = 51/68 (75%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQVQ S IAAD+RYKGIVD VR+PKEQG + WRGN
Sbjct: 34 TAAAVSKTAVAPIERV-KLLLQVQDASLTIAADKRYKGIVDVLVRVPKEQGYAALWRGNL 92
Query: 482 ANVIRYFP 505
ANVIRYFP
Sbjct: 93 ANVIRYFP 100
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKKTQFW 585
P QALNFAFKD YK +F G+DKK FW
Sbjct: 100 PTQALNFAFKDTYKNIFQKGLDKKKDFW 127
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 392 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 490
A ++ +KG+ D V+I K G + +RG F +V
Sbjct: 165 ANEREFKGLADCLVKIAKSDGPIGLYRGFFVSV 197
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/68 (67%), Positives = 51/68 (75%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQVQ S IAAD+RYKGIVD VR+PKEQG + WRGN
Sbjct: 34 TAAAVSKTAVAPIERV-KLLLQVQDASLTIAADKRYKGIVDVLVRVPKEQGYAALWRGNL 92
Query: 482 ANVIRYFP 505
ANVIRYFP
Sbjct: 93 ANVIRYFP 100
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKKTQFW 585
P QALNFAFKD YK +F G+DKK FW
Sbjct: 100 PTQALNFAFKDTYKNIFQKGLDKKKDFW 127
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 392 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 490
A ++ +KG+ D V+I K G + +RG F +V
Sbjct: 165 ANEREFKGLADCLVKIAKSDGPIGLYRGFFVSV 197
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2
Query: 302 SARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 481
+A + KTAVAP V KLLLQV VS+ + AD++YKGI+D R+PKEQG +FWRGN
Sbjct: 21 TAAAISKTAVAPIERV-KLLLQVSDVSETVTADKKYKGIMDVLARVPKEQGYAAFWRGNL 79
Query: 482 ANVIRYFP 505
ANV+RYFP
Sbjct: 80 ANVLRYFP 87
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 502 PDQALNFAFKDKYKQVFLGGVDKKTQFW 585
P QALNFAFKD YK++F G+DK +FW
Sbjct: 87 PTQALNFAFKDTYKKMFQEGIDKNKEFW 114
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 398 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 490
D+ ++G+ D FV+I K G + +RG F +V
Sbjct: 154 DREFQGLTDCFVKIVKSDGPIGLYRGFFVSV 184
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +2
Query: 299 SSARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 478
++A + KT +AP V KL+LQ+Q+ +A + RYKGIVD F+R+P+EQG LSFWRGN
Sbjct: 26 ATAAAISKTVIAPVERV-KLILQLQNSQTTLALENRYKGIVDCFIRVPREQGFLSFWRGN 84
Query: 479 FANVIR 496
+ N++R
Sbjct: 85 WVNILR 90
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +2
Query: 299 SSARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 478
S+A + KT AP V KL+LQ+Q S+ A+ Y GI D +I EQG ++ WRGN
Sbjct: 21 SAAAAISKTTTAPFDRV-KLVLQLQRQSEFAMAE--YNGIRDCISKIRLEQGAMALWRGN 77
Query: 479 FANVIRYFP 505
A V R P
Sbjct: 78 GAGVARCLP 86
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 499 LPDQALNFAFKDKYKQVFLGGVDKKTQF 582
LP+ LNFAF+D Y+ L VD+ F
Sbjct: 85 LPNHTLNFAFRDIYRNTLLKNVDRNESF 112
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 401 QRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 496
+ Y G+V+A RI KE+G+L+ WRG V+R
Sbjct: 145 RNYTGVVNALTRITKEEGVLTLWRGCTPTVLR 176
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 392 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 505
A Y G++D ++ KE+G +S W+G A V R P
Sbjct: 595 AGQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSP 632
Score = 34.3 bits (75), Expect = 0.078
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 323 TAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 502
TAV P V K +Q Q S + YK +D F ++ K +GLL +RG ++
Sbjct: 385 TAVYPIDLV-KTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVA 443
Query: 503 P 505
P
Sbjct: 444 P 444
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 34.7 bits (76), Expect = 0.059
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 407 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 505
YKG+VD +++I K +G S ++G + IR P
Sbjct: 271 YKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAP 303
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +2
Query: 287 AGRVSSARRLPKTAVAPNRSVSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 466
AG V+ A + +T AP + K+ LQV + G+V + E G+ SF
Sbjct: 250 AGGVAGA--MSRTCTAPFDRI-KVYLQVN------STKTNKLGVVSCVHLLHAEGGIKSF 300
Query: 467 WRGNFANVIRYFP 505
WRGN NVI+ P
Sbjct: 301 WRGNGINVIKIAP 313
>CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical
protein C42C1.10 protein.
Length = 313
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 347 VSKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 478
V K+ Q+Q + +YKG++ + I +E+G +FW+G+
Sbjct: 38 VLKIRFQLQEEPIRGKKSGKYKGVMQSIFLITREEGAHAFWKGH 81
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 353 KLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 505
K LLQVQ + Y G +D ++ K+ G+ S +RG A ++R P
Sbjct: 129 KCLLQVQQAGSA-GSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIP 178
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 353 KLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 505
K LLQVQ + Y G +D ++ K+ G+ S +RG A ++R P
Sbjct: 129 KCLLQVQQAGSA-GSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIP 178
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 353 KLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 505
K LLQVQ + Y G +D ++ K+ G+ S +RG A ++R P
Sbjct: 129 KCLLQVQQAGSA-GSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIP 178
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +1
Query: 319 KDRRSTQSERVKAAAPSTARQQADRRRPALQGYRRRLRPHPQGAGSPFILAW*LRQRHQV 498
+D +A PS++R+Q+ RR + G R R + + AGSP + A L ++
Sbjct: 361 EDEEDDDMPSTSSALPSSSRRQS--RRRSSTGATNRKRKYTRRAGSPAVFAGNLMKKDSH 418
Query: 499 LPDQALNFAFKDKYKQVFLGGVDKKT 576
+++ + V LG VD+ T
Sbjct: 419 ESSRSMPSSVGWTPVVVSLGDVDRPT 444
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 319 KDRRSTQSERVKAAAPSTARQQADRRRPALQGYRRRLRPHPQGAGSPFILAW*LRQRHQV 498
+D +A PS++R+Q+ RR + G R R + + AGSP + A L ++
Sbjct: 361 EDEEDDDMPSTSSALPSSSRRQS--RRRSSTGATNRKRKYTRRAGSPAVFAGNLMKKVHF 418
Query: 499 LPDQALNFAFKDKYKQVFLG-GVDKKTQFW 585
F K K F+ + KKT+F+
Sbjct: 419 -------FGLKYLQKLTFMSLEIKKKTKFY 441
>AF003389-2|AAC71132.1| 321|Caenorhabditis elegans Hypothetical
protein F23H11.3 protein.
Length = 321
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 127 LSGFVNPPIRRCGRQTSQLPNNISTLSERIHIIRNKNVETFADPVAFG 270
++G PP RR G + + T ++I +RN NV P G
Sbjct: 265 IAGVTAPPGRRMGHAGAIIAGGKGTAGDKIEALRNANVVVTDSPAKLG 312
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 407 YKGIVDAFVRIPKEQGLLSFWRGNFANVI 493
YKGIVD V+ K++ + ++G F I
Sbjct: 35 YKGIVDCMVKTMKQESVYGLYKGMFVPFI 63
>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
protein ZK675.2 protein.
Length = 1027
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 276 PLAERDRIGEGFDIFVSNYVNP 211
PL RI EGF +FV+ Y +P
Sbjct: 248 PLENVSRIMEGFSVFVNGYTDP 269
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 274 GTFLGWAGIFRPPSSKDRRSTQSERVKAAAPSTARQQADRRRPALQGYRRRLRPHPQG 447
G+ G G R SSK RS R ++ + S++R ++ RR + + RRR +G
Sbjct: 117 GSVYGRTG--RSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARG 172
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 238 VETFADPVAFG*GTFLGWAGIFRPPSSKDRRSTQSERVKAAAPSTARQQADRRRPALQGY 417
+E+F + G G L I RPP+S S+RV A A+++ +RP++
Sbjct: 701 LESFTATASLGGGRSLSSGVISRPPTSSSPGGIFSQRVMGA---VAQEKGPAKRPSVLSR 757
Query: 418 R 420
R
Sbjct: 758 R 758
>AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein.
Length = 279
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 238 VETFADPVAFG*GTFLGWAGIFRPPSSKDRRSTQSERVKAAAPSTARQQADRRRPALQGY 417
+E+F + G G L I RPP+S S+RV A A+++ +RP++
Sbjct: 18 LESFTATASLGGGRSLSSGVISRPPTSSSPGGIFSQRVMGA---VAQEKGPAKRPSVLSR 74
Query: 418 R 420
R
Sbjct: 75 R 75
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 238 VETFADPVAFG*GTFLGWAGIFRPPSSKDRRSTQSERVKAAAPSTARQQADRRRPALQGY 417
+E+F + G G L I RPP+S S+RV A A+++ +RP++
Sbjct: 701 LESFTATASLGGGRSLSSGVISRPPTSSSPGGIFSQRVMGA---VAQEKGPAKRPSVLSR 757
Query: 418 R 420
R
Sbjct: 758 R 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,639,089
Number of Sequences: 27780
Number of extensions: 316807
Number of successful extensions: 925
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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