Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060814.seq
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 106  LRDT*VHCSTKQDI 65
            +R T +HC T+QD+
Sbjct: 1187 VRTTPIHCQTEQDV 1200


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = -1

Query: 192 YVYMYSFNISVVHR 151
           Y++ Y+F+++++HR
Sbjct: 121 YLFYYAFSVALLHR 134


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 INTTTSKXYTDNKTFHQIHILKVTLYLM 497
           IN T    ++DNK   +I  +   LY++
Sbjct: 206 INRTMRSFFSDNKQDDKIPQISDNLYIL 233


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 244  RFHYSFLLNYQILFYSSLCVY 182
            R  ++ LLN   LF    CVY
Sbjct: 1122 RICWNVLLNCVYLFLCGFCVY 1142


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 INTTTSKXYTDNKTFHQIHILKVTLYLM 497
           IN T    ++DNK   +I  +   LY++
Sbjct: 206 INRTMRSFFSDNKQDDKIPQISDNLYIL 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,351
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)