Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060813.seq
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 142 2e-34
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 142 2e-34
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 142 2e-34
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 113 7e-26
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 113 7e-26
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 85 3e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 60 2e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 60 2e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 60 2e-09
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 59 3e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 59 3e-09
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.006
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.073
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.22
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.22
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.68
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.68
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.90
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.90
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.90
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.6
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.6
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical... 28 6.3
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 28 6.3
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 142 bits (344), Expect = 2e-34
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 479 NGQTREHA 502
NGQTREHA
Sbjct: 130 NGQTREHA 137
Score = 113 bits (273), Expect = 7e-26
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 198 QTYHREVREGGPGNG*RILKYAWVLDKLKAERE 296
+ + +E +E G G+ KYAWVLDKLKAERE
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERE 68
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 142 bits (344), Expect = 2e-34
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 479 NGQTREHA 502
NGQTREHA
Sbjct: 130 NGQTREHA 137
Score = 113 bits (273), Expect = 7e-26
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 514 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIQKEVS 615
TLGVKQLIV NKMDSTEPP+SE RF EI EVS
Sbjct: 142 TLGVKQLIVACNKMDSTEPPFSEARFTEITNEVS 175
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 198 QTYHREVREGGPGNG*RILKYAWVLDKLKAERE 296
+ + +E +E G G+ KYAWVLDKLKAERE
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 142 bits (344), Expect = 2e-34
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 479 NGQTREHA 502
NGQTREHA
Sbjct: 130 NGQTREHA 137
Score = 113 bits (273), Expect = 7e-26
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 514 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIQKEVS 615
TLGVKQLIV NKMDSTEPP+SE RF EI EVS
Sbjct: 142 TLGVKQLIVACNKMDSTEPPFSEARFTEITNEVS 175
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 198 QTYHREVREGGPGNG*RILKYAWVLDKLKAERE 296
+ + +E +E G G+ KYAWVLDKLKAERE
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERE 68
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 113 bits (273), Expect = 7e-26
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 198 QTYHREVREGGPGNG*RILKYAWVLDKLKAER 293
+ + +E +E G G+ KYAWVLDKLK +
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKVTK 67
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 113 bits (273), Expect = 7e-26
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53
Score = 102 bits (244), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 442
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1
Query: 532 LIVGVNKMDSTEPPYSEPRFEEIQKEVS 615
L+V NKMDSTEPP+SE RF EI EVS
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVS 141
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 198 QTYHREVREGGPGNG*RILKYAWVLDKLKAERE 296
+ + +E +E G G+ KYAWVLDKLKAERE
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERE 68
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 479 NGQTREHA 502
GQT+EHA
Sbjct: 293 GGQTKEHA 300
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 103 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK S
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKAS 216
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +1
Query: 514 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIQKEVS 615
+LGV QLIV VNK+D+ + +S+ RF+EI+ +S
Sbjct: 305 SLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLS 336
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 479 NGQTREHA 502
GQT+EHA
Sbjct: 311 GGQTKEHA 318
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 103 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK S
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKAS 234
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +1
Query: 514 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIQKEVS 615
+LGV QLIV VNK+D+ + +S+ RF+EI+ +S
Sbjct: 323 SLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLS 354
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G +
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDR 231
Query: 479 NGQTREHA 502
GQTREH+
Sbjct: 232 GGQTREHS 239
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = +1
Query: 97 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 252
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRES 155
Score = 35.1 bits (77), Expect = 0.042
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 514 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIQKEVSHTSRR 630
T GVK L++ VNKMD + E RF+EI+ +++ R+
Sbjct: 244 TAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRK 282
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 151
Query: 479 NGQTREH 499
QTREH
Sbjct: 152 --QTREH 156
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 100 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 249
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 97
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 479 NGQTREH 499
QTREH
Sbjct: 153 --QTREH 157
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 100 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 249
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 479 NGQTREH 499
QTREH
Sbjct: 153 --QTREH 157
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 100 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 249
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 479 NGQTREH 499
QT+EH
Sbjct: 148 --QTKEH 152
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 106 KTHINIVVIGHVDSGKSTTT 165
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/67 (49%), Positives = 41/67 (61%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 478
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 479 NGQTREH 499
QT+EH
Sbjct: 148 --QTKEH 152
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 106 KTHINIVVIGHVDSGKSTTT 165
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 299 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.073
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 118 NIVVIGHVDSGKSTTTGHLIYKCGGI 195
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 118 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 234
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 118 NIVVIGHVDSGKSTTTGHLIYKCGGID 198
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 299 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 189
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 305 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 189
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 305 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 70 FVIRD*PEMGKEKTHINIVVIGHVDSGKSTTTGHLIY 180
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 70 FVIRD*PEMGKEKTHINIVVIGHVDSGKSTTTGHLIY 180
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 308 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 308 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 454
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.90
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 347 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 442
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 356 IIDAPGHRDFIKNMITGTSQADCAVLIV 439
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 115 INIVVIGHVDSGKSTTT 165
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 350 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 499
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEH 116
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 115 INIVVIGHVDSGKSTTT 165
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 118 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSLNMLGYWTN 279
+I+ GH+D S GH +K GI E FE E ++ + GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 350 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 445
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical
protein Y47G6A.32 protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 433 EHS-AISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQAY 257
EH ++++ CD V E S +D N +L S E PE + + S+ LS
Sbjct: 104 EHGDSVAVNPHCDGVTFEGITSTDFDDSNCLLVSCE-PECQFNGPSTQHSSGVLSVLIHR 162
Query: 256 LRILYPFPGPPSRTSRWYV 200
+R P PS T Y+
Sbjct: 163 IRNETTTPPTPSTTKSSYI 181
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 154 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSLNMLGYWT 276
STTT HL+ + GG+ Q +GK N++G+ T
Sbjct: 234 STTTAHLVSQAGGLSPLATMP-SCNVQVLGKTKKNLIGFST 273
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 350 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 439
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 350 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 439
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,631
Number of Sequences: 27780
Number of extensions: 294580
Number of successful extensions: 904
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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