Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060811.seq
         (471 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.62 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.62 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    24   0.81 
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   4.3  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 409 VSSLLTTFESDCHRMKCRTVDGF 341
           V +L T  E +C++MK  T+D F
Sbjct: 253 VKTLTTVVEKECYKMKV-TIDAF 274


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 409 VSSLLTTFESDCHRMKCRTVDGF 341
           V +L T  E +C++MK  T+D F
Sbjct: 179 VKTLTTVVEKECYKMKV-TIDAF 200


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -1

Query: 315 LETGARFISHASPFATSVSSFLLRLHHRQDHRPDP 211
           LE       +  P  T +S F+  +HH + + P+P
Sbjct: 68  LEVDCNIGGYDFPKDTFLSLFIYGMHHNEKYFPEP 102


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 279 PFATSVSSFLLRLHHRQDHRPDP 211
           P +T     +  LHH  D  PDP
Sbjct: 99  PKSTITHLHIYDLHHNPDIYPDP 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,340
Number of Sequences: 336
Number of extensions: 1407
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)