Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060811.seq
         (471 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3175|AAF53856.2|  916|Drosophila melanogaster CG10662-P...    28   5.5  
AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p pro...    28   7.3  
AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA...    28   7.3  
AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB...    28   7.3  
AY061390-1|AAL28938.1|  264|Drosophila melanogaster LD31238p pro...    27   9.7  
AL031765-9|CAA21127.1|  264|Drosophila melanogaster EG:22E5.6 pr...    27   9.7  
AE014298-326|AAF45718.1|  264|Drosophila melanogaster CG4194-PA ...    27   9.7  

>AE014134-3175|AAF53856.2|  916|Drosophila melanogaster CG10662-PA
           protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 257 LFCCDYIIGKTTDQILDESVRSTL-DRXGRLIHGSSGXXXXXXXXXDHVG 111
           +  C YI GKTT Q LD  VR T  D   R+  G++           H+G
Sbjct: 485 VIACTYISGKTTWQNLDYVVRKTFKDYVARIDPGTNLGLNTDSITSYHLG 534


>AY118362-1|AAM48391.1|  834|Drosophila melanogaster RE07883p
           protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +3

Query: 9   LGEVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRXDETRAAMDQTTXAV 185
           L +  +A++K+LN     LKTD+ +    N    SD  D I D    T   +   T  V
Sbjct: 433 LQDALRAISKKLNNFTHGLKTDVNRNGSGNGDVSSDSPDFIEDDDKFTSRTISDPTYPV 491


>AE013599-2535|AAF57814.1|  858|Drosophila melanogaster CG4966-PA,
           isoform A protein.
          Length = 858

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +3

Query: 9   LGEVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRXDETRAAMDQTTXAV 185
           L +  +A++K+LN     LKTD+ +    N    SD  D I D    T   +   T  V
Sbjct: 457 LQDALRAISKKLNNFTHGLKTDVNRNGSGNGDVSSDSPDFIEDDDKITSRTISDPTYPV 515


>AE013599-2533|AAG22260.1|  834|Drosophila melanogaster CG4966-PB,
           isoform B protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +3

Query: 9   LGEVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRXDETRAAMDQTTXAV 185
           L +  +A++K+LN     LKTD+ +    N    SD  D I D    T   +   T  V
Sbjct: 433 LQDALRAISKKLNNFTHGLKTDVNRNGSGNGDVSSDSPDFIEDDDKITSRTISDPTYPV 491


>AY061390-1|AAL28938.1|  264|Drosophila melanogaster LD31238p
           protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 267 SVSSFLLRLHHRQDHRPDP 211
           SV+S     HH+QDH PDP
Sbjct: 162 SVASDQQHNHHQQDHSPDP 180


>AL031765-9|CAA21127.1|  264|Drosophila melanogaster EG:22E5.6
           protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 267 SVSSFLLRLHHRQDHRPDP 211
           SV+S     HH+QDH PDP
Sbjct: 162 SVASDQQHNHHQQDHSPDP 180


>AE014298-326|AAF45718.1|  264|Drosophila melanogaster CG4194-PA
           protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 267 SVSSFLLRLHHRQDHRPDP 211
           SV+S     HH+QDH PDP
Sbjct: 162 SVASDQQHNHHQQDHSPDP 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,077,774
Number of Sequences: 53049
Number of extensions: 301320
Number of successful extensions: 824
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)