Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060809.seq
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 33 0.12
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 31 0.48
AC006648-5|AAF39853.1| 701|Caenorhabditis elegans Hypothetical ... 31 0.48
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 1.9
U40424-1|AAA81456.2| 461|Caenorhabditis elegans Twik family of ... 29 1.9
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 1.9
AF083650-1|AAC32861.1| 461|Caenorhabditis elegans potassium cha... 29 1.9
AF003151-20|AAK18920.2| 251|Caenorhabditis elegans Hypothetical... 29 1.9
Z81514-1|CAB04188.1| 144|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 29 3.4
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 29 3.4
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 3.4
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 3.4
AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical... 29 3.4
Z93383-7|CAB07621.1| 285|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81514-3|CAB04190.1| 78|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 28 5.9
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 5.9
AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical ... 28 5.9
Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 27 7.8
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 27 7.8
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 27 7.8
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 27 7.8
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 27 7.8
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 27 7.8
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 284 SDLNQLIELTQESLATAT-----SKHLKSDLQSNEQNNLDEEY----ARFMAEMNDSNAY 436
S+ + + + +S AT+T + L S +N+ N +EE F E + S+
Sbjct: 1638 SESQETLRIRHDSTATSTVPTPRRRRLLSGNTTNDTNEDNEERNGQPREFDGESSSSDDD 1697
Query: 437 NDDSKNKNDSEENNGNSDIEDD 502
NDD + +D EE++ + D +DD
Sbjct: 1698 NDDDDDDDDEEEDDDDDDDDDD 1719
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 284 SDLNQLIELTQESLATAT-----SKHLKSDLQSNEQNNLDEEY----ARFMAEMNDSNAY 436
S+ + + + +S AT+T + L S +N+ N +EE F E + S+
Sbjct: 1638 SESQETLRIRHDSTATSTVPTPRRRRLLSGNTTNDTNEDNEERNGQPREFDGESSSSDDD 1697
Query: 437 NDDSKNKNDSEENNGNSDIEDD 502
NDD + +D EE++ + D +DD
Sbjct: 1698 NDDDDDDDDEEEDDDDDDDDDD 1719
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 302 IELTQESLATATSKHLKS----DLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSE 469
I++ ++ LA + L+ D ++ +L + A A+ N DD KNK S
Sbjct: 528 IDMDEQGLAARYEEQLRKQKHRDDDDEDREDLTDMVAEHAAKQNRKRKVQDDKKNKTSSS 587
Query: 470 ENNGNS 487
++G+S
Sbjct: 588 SSSGSS 593
>AC006648-5|AAF39853.1| 701|Caenorhabditis elegans Hypothetical
protein F59H6.2 protein.
Length = 701
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 341 KHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
+HL+SDLQSNE ++ ++ + +S D S + +EE N S E+D
Sbjct: 23 EHLRSDLQSNEVGDVAIKHQNEETCVRNSPTEVDTSGRTSRNEEENVESSQEND 76
>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
protein K04D7.5b protein.
Length = 1287
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 356 DLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
DL+ E + D++Y E ND++ N + + EEN+ +IED+
Sbjct: 132 DLEYEEDDEYDDDYI----EENDTSTRNKLNAGSEEDEENDDEEEIEDE 176
>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
protein K04D7.5a protein.
Length = 1338
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 356 DLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
DL+ E + D++Y E ND++ N + + EEN+ +IED+
Sbjct: 132 DLEYEEDDEYDDDYI----EENDTSTRNKLNAGSEEDEENDDEEEIEDE 176
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 278 LQSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNK 457
L+S LN I L E L+TA+ L S+ ++ + + AE + DD
Sbjct: 2378 LRSRLNLRI-LGNEKLSTASKDSLPSEALHSKWVPPQKNIVQLFAEKPSVMMHEDDDDAY 2436
Query: 458 NDSEENNGNSDIEDD 502
EE+ GNS +D+
Sbjct: 2437 ESDEEDKGNSYSDDE 2451
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +2
Query: 275 TLQSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKN 454
T +S+L++L ES + ++ + SNE + +E MAEM D A+ ++
Sbjct: 678 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEAHWKTKRD 737
Query: 455 KNDSEENNGNSDIED 499
+ +++ D E+
Sbjct: 738 EFEAQMLRNQEDNEE 752
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +2
Query: 275 TLQSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKN 454
T +S+L++L ES + ++ + SNE + +E MAEM D A+ ++
Sbjct: 680 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEAHWKTKRD 739
Query: 455 KNDSEENNGNSDIED 499
+ +++ D E+
Sbjct: 740 EFEAQMLRNQEDNEE 754
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 278 LQSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSK-N 454
LQ +L +L + E T T L+S L + Q+ L++ + + N ++ +NDD N
Sbjct: 1555 LQDELQRLKD--NEIELTETISALQSKLY-DVQSELEDTKQKLVEAENSASGWNDDDAWN 1611
Query: 455 KNDSEENNGNSDIEDDLS 508
KN++E +E ++S
Sbjct: 1612 KNENEIEEVKKALEIEIS 1629
>U40424-1|AAA81456.2| 461|Caenorhabditis elegans Twik family of
potassium channelsprotein 18 protein.
Length = 461
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 359 LQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSD 490
L S ++N+D+EYAR + E + ++ + D E N + D
Sbjct: 308 LASGMKDNIDQEYARALNEAREDGEVDEHVDPEEDPENNKKSFD 351
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +2
Query: 275 TLQSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKN 454
T +S+L++L ES + ++ + SNE + +E MAEM D A+ ++
Sbjct: 680 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEAHWKTKRD 739
Query: 455 KNDSEENNGNSDIED 499
+ +++ D E+
Sbjct: 740 EFEAQMLRNQEDNEE 754
>AF083650-1|AAC32861.1| 461|Caenorhabditis elegans potassium
channel subunit n2P18 protein.
Length = 461
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 359 LQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSD 490
L S ++N+D+EYAR + E + ++ + D E N + D
Sbjct: 308 LASGMKDNIDQEYARALNEAREDGEVDEHVDPEEDPENNKKSFD 351
>AF003151-20|AAK18920.2| 251|Caenorhabditis elegans Hypothetical
protein D1007.16 protein.
Length = 251
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 389 EEYARFMAEMN-DSNAYNDDSKNKNDSEENNGNSDIEDDLS 508
EE A+ +M D++ + DS +DS+++NG+S ++D S
Sbjct: 146 EEKAKIQKQMQRDTSDSSSDSDGSSDSDKSNGDSSDDEDES 186
>Z81514-1|CAB04188.1| 144|Caenorhabditis elegans Hypothetical
protein F26F2.2 protein.
Length = 144
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 368 NEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDS--EENN 478
++QN+ ++ +FM EMN+S +D +++ ++ ENN
Sbjct: 80 DKQNSQQNDFMKFMMEMNNSARLSDQARDDRNAIRSENN 118
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 386 DEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIE 496
DE+ + MAEMND N ++ K ++ G ++
Sbjct: 612 DEQMEKEMAEMNDQNDNTEEDAEKKKKKKKRGKKKVK 648
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 305 ELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGN 484
+ T+ + +T H +SD E+ +D++ ++ S DD N ND +N
Sbjct: 568 KFTETTTNGSTKTHTESDDSEVERMEVDDQVDEAQITVSSSK---DDGMNGND--KNEDE 622
Query: 485 SDIEDDLSV 511
D +DD+ V
Sbjct: 623 EDDDDDMDV 631
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 305 ELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGN 484
+ T+ + +T H +SD E+ +D++ ++ S DD N ND +N
Sbjct: 568 KFTETTTNGSTKTHTESDDSEVERMEVDDQVDEAQITVSSSK---DDGMNGND--KNEDE 622
Query: 485 SDIEDDLSV 511
D +DD+ V
Sbjct: 623 EDDDDDMDV 631
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 317 ESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIE 496
E+L ++ D +++ +EEY E + + ++D + DSEE+ + E
Sbjct: 862 ETLEVTKKVEVEDDSDCLDEDEDEEEYED---EDEEESEEDEDEEEDEDSEEDEDEEEYE 918
Query: 497 DDLSVY 514
D+ S Y
Sbjct: 919 DEESEY 924
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 317 ESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIE 496
E+L ++ D +++ +EEY E + + ++D + DSEE+ + E
Sbjct: 862 ETLEVTKKVEVEDDSDCLDEDEDEEEYED---EDEEESEEDEDEEEDEDSEEDEDEEEYE 918
Query: 497 DDLSVY 514
D+ S Y
Sbjct: 919 DEESEY 924
>AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical
protein Y37E3.10 protein.
Length = 342
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 389 EEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
+E AR + +++D D +++ +SEE+ + EDD
Sbjct: 268 KEEARIVTDIDDEKKKGDGDEDEEESEEDEDEEEDEDD 305
>Z93383-7|CAB07621.1| 285|Caenorhabditis elegans Hypothetical
protein F54B8.8 protein.
Length = 285
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 172 IFCRYRFD--FHYLCGYNIYNRVNLIYVFSF*CINKINLKTL 53
++CR+ D F++LC + + +N IY+FS K+ +K L
Sbjct: 45 VYCRFAVDTLFYFLCEFFV--SINKIYLFSRQISEKVVIKNL 84
>Z81514-3|CAB04190.1| 78|Caenorhabditis elegans Hypothetical
protein F26F2.4 protein.
Length = 78
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +2
Query: 368 NEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGN 484
++QN+ ++ + M EMN+S +D +++ ++ N N
Sbjct: 14 DKQNSRQHDFMKLMMEMNNSARLSDQARDDRNAIRNENN 52
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 371 EQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
E+ +LD++ + +D + +D+ + ND+E+++G+ D +DD
Sbjct: 252 EEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDD 295
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 371 EQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
E+ +LD++ + +D + +D+ + ND+E+++G+ D +DD
Sbjct: 252 EEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDD 295
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +2
Query: 302 IELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNG 481
I+ ++E A + ++ K D++ ++ + +DE+ ++ND N D +D ++ +
Sbjct: 797 IDYSKEFGAEKSKRNKKKDVEEDDVD-MDEDDD---IDLNDLNEEEDGGMEDDDEDDGDM 852
Query: 482 NSDIEDD 502
+ D EDD
Sbjct: 853 DDDDEDD 859
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 359 LQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNS 487
L+ NE N +EE + E +D + +D+S + +D EE GNS
Sbjct: 1387 LKDNEDENDEEEDEQ--REDHDEDEDSDESGDGDDDEEIGGNS 1427
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
ZK1251.9 protein.
Length = 1701
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 359 LQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNS 487
L+ NE N +EE + E +D + +D+S + +D EE GNS
Sbjct: 1387 LKDNEDENDEEEDEQ--REDHDEDEDSDESGDGDDDEEIGGNS 1427
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 KSDLQSNEQNNLDEEYAR-FMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
++D ++++ NN D+ F ++ N N Y N+ND ++ NGN + +D+
Sbjct: 152 RNDGENDDWNNGDQNNNNNFNSKNNRMNKYG----NRNDGDDYNGNGNNQDN 199
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 KSDLQSNEQNNLDEEYAR-FMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
++D ++++ NN D+ F ++ N N Y N+ND ++ NGN + +D+
Sbjct: 152 RNDGENDDWNNGDQNNNNNFNSKNNRMNKYG----NRNDGDDYNGNGNNQDN 199
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 350 KSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
K D + +E+ + EE + + D +DD K ++ + N D +DD
Sbjct: 113 KKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD 163
>AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical
protein F38A1.8 protein.
Length = 450
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 350 KSDLQSNEQNNLDEEYARFMAEMNDS-NAYNDDSKNKNDSEENN 478
+SD + N++N DEE RF+ M + D K+ +S++ +
Sbjct: 256 RSDPKENDENAADEEKNRFVESMKEQIGTLKGDLKSLQESDDED 299
>Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical
protein M28.7 protein.
Length = 682
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 281 QSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKN 460
++ L QL +L Q A + K S S + + +E+ S YNDD +
Sbjct: 76 ENALEQLDKLKQRLTALSPEKEQLSFSVSVDSQSEEEKPKMAAIGRRKSTMYNDDESEDS 135
Query: 461 DSEENNGNSDIEDD 502
D++ +D++ D
Sbjct: 136 DNDSEIIETDVQLD 149
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 362 QSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDDLS 508
QS + N + SNA+ D +K +D +N NS DDL+
Sbjct: 22 QSPQCNQTTPQIKSMKPNFGASNAFYDIAKGISDGLQNTPNSKTYDDLN 70
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 386 DEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDDLSVYWV*SVRFIIPPM 550
D+E A F++ N + N NKN S++ + + ED L + F+I P+
Sbjct: 25 DDEAADFLSHTNIDDPNNSSDPNKN-SDQGDTMGEDEDRLVIDLFREYNFLIRPV 78
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 386 DEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDDLSVYWV*SVRFIIPPM 550
D+E A F++ N + N NKN S++ + + ED L + F+I P+
Sbjct: 25 DDEAADFLSHTNIDDPNNSSDPNKN-SDQGDTMGEDEDRLVIDLFREYNFLIRPV 78
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 362 QSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDD 502
+ E+ N DE+ + ND + +D+ + D EE+ + EDD
Sbjct: 36 EDEEEENEDEDEDE--DDDNDDDEDDDEEEEDEDEEEDEAEDEAEDD 80
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 LIELTQESLATATSKHLKSD-LQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEEN 475
+IE T++ LA + +++ D L++ + + E+ + ++ ND + + K D
Sbjct: 1419 VIEETEQELAIEENLNVEEDDLRTTSEESEGEDEVKNDSDPNDISDFWKIFKVTEDEAGV 1478
Query: 476 NGNSDIEDDL 505
NG+ D ++DL
Sbjct: 1479 NGDRDSDEDL 1488
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +2
Query: 350 KSDLQSNEQNNLDEEYARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIEDDLSVY 514
+S +E+ D+E ++ ND + Y DD + E N D ED++ +
Sbjct: 100 ESTTGDHEEEEEDDEDGDDESDHNDYD-YEDDGERSEHDHEQTDNDDDEDEIEPF 153
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/73 (19%), Positives = 36/73 (49%)
Frame = +2
Query: 260 KESLLTLQSDLNQLIELTQESLATATSKHLKSDLQSNEQNNLDEEYARFMAEMNDSNAYN 439
++S +T + + ++ Q +++ S ++++ + + ARF++ +DSNA
Sbjct: 4 RQSSVTEERPRSNSVDTAQVRVSSQHSSSQRANVMTAAEFMQTMRNARFLSSSSDSNASE 63
Query: 440 DDSKNKNDSEENN 478
DD+ + + N
Sbjct: 64 DDAGPSHSTTHGN 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,850,097
Number of Sequences: 27780
Number of extensions: 227492
Number of successful extensions: 1174
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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