Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060808.seq
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    31   0.006
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.2  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   2.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 31.5 bits (68), Expect = 0.006
 Identities = 16/54 (29%), Positives = 34/54 (62%)
 Frame = +3

Query: 324 KVTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAV 485
           ++ ++  RAF+ L +L+ L L  N+I+ +  E F+ L  +L+ L+L  N ++++
Sbjct: 127 RIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNL-PELEDLDLAYNSISSL 179



 Score = 30.7 bits (66), Expect = 0.011
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 503 SSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFP 631
           +++ L+ L+   NRI+ I    F  L NL  +  +HN+LR  P
Sbjct: 294 NTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLP 336



 Score = 30.3 bits (65), Expect = 0.014
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 509 ENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQL 619
           ++LK+L ++ N+I +I+   F  L  L+ L LA+N +
Sbjct: 140 KSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSI 176



 Score = 30.3 bits (65), Expect = 0.014
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 515 LKKLEMQENRITSISEGDFAGLRNLDSLGLAHN 613
           L  L++  NR+  I  G F G+  L SL L HN
Sbjct: 396 LSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHN 428



 Score = 28.3 bits (60), Expect = 0.057
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 500 GSSENLKKLEMQENRITSISEGDFAGLR-NLDSLGLAHNQL 619
           G  +N+K L++  N ITS+++  F  +  +L  L L HN+L
Sbjct: 220 GGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKL 260



 Score = 27.9 bits (59), Expect = 0.075
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +3

Query: 351 FVGLDTLEILTLYEN-RISV-VDGEAFKGLEKKLKRLNLGGNELTAVP 488
           F G+  L  L L  N ++++ ++G +F+GLE  L  LNL    L+ VP
Sbjct: 414 FKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLDNVSLSQVP 461



 Score = 27.5 bits (58), Expect = 0.099
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 339 HNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGN 470
           H         L  L L  NR+  +D   FKG+  +L  LNLG N
Sbjct: 386 HGGQLARFKCLSWLDLSYNRLGQIDAGTFKGI-PRLASLNLGHN 428



 Score = 26.2 bits (55), Expect = 0.23
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 485 PAKSAGSSENLKKLEMQENRITSISEGDFAG--LRNLDSLGLAHNQLR 622
           P  S     +LKK+ +Q+N I  I  G F G   R+L  +  + N +R
Sbjct: 58  PDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVR 105



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 509 ENLKKLEMQENRITSISEGDFAGLRNLDSLGLAH 610
           +NL +LE  +    SIS  DF     + SLG+ H
Sbjct: 161 QNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFH 194



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 378 LTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVP 488
           L+L  N +  V  E   G    L+ LNL  N+L+AVP
Sbjct: 471 LSLAFNSLPTVALEV-AGNISSLRYLNLDYNDLSAVP 506


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 445 SFFSNPLKASPSTTEILFSYRVSISRVSSPTNALLCTAVT 326
           + F + L    +   +L  +++SI   +SPTN+   T  T
Sbjct: 395 NLFKSLLATMVTYLVVLLQFQISIPEEASPTNSTTITTQT 434


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 256 SYSGRRPAESACCIL*FV*FADKFTIWWHLRAHS 155
           ++SG RP     C   F   +D  T+  HLR HS
Sbjct: 71  THSGERPYRCRLCKKAF---SDSSTLTKHLRIHS 101


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 256 SYSGRRPAESACCIL*FV*FADKFTIWWHLRAHS 155
           ++SG RP     C   F   +D  T+  HLR HS
Sbjct: 327 THSGERPYRCRLCKKAF---SDSSTLTKHLRIHS 357


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 363 DTLEILTLYENRISVVDGEAFKGLEKKLKR 452
           D  + L +Y N  SV+DG+  K    +LKR
Sbjct: 155 DDHDRLRMYINTESVLDGDWKKCFNIRLKR 184


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +1

Query: 223 KLTQLDVSQNS 255
           KL+Q+D+S+NS
Sbjct: 5   KLSQMDISENS 15


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 381 TLYENRISVVDG 416
           ++YE RISVV G
Sbjct: 203 SIYEERISVVSG 214


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 606 ARPKESRLRNPAKSPSEIEV 547
           +RP  S LR P   P + EV
Sbjct: 45  SRPNWSYLRTPQFEPQQFEV 64


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 606 ARPKESRLRNPAKSPSEIEV 547
           +RP  S LR P   P + EV
Sbjct: 65  SRPNWSYLRTPQFEPQQFEV 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,043
Number of Sequences: 336
Number of extensions: 3065
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)