Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060808.seq
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 36 0.021
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 36 0.028
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 35 0.048
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 35 0.064
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 34 0.11
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 33 0.15
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 33 0.26
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 32 0.34
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37) 30 1.8
SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06) 29 2.4
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11) 29 3.2
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 29 3.2
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 29 4.2
SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39) 29 4.2
SB_26630| Best HMM Match : ig (HMM E-Value=0.0021) 29 4.2
SB_24472| Best HMM Match : I-set (HMM E-Value=0) 28 5.5
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19) 28 7.3
SB_41446| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 27 9.7
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 27 9.7
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/108 (26%), Positives = 49/108 (45%)
Frame = +3
Query: 255 LATIPTSSFTXXXXXXXXXXXXXKVTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGL 434
++TI +++F +++ + F L +L L L NR+S + + F+GL
Sbjct: 80 ISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLPEDTFEGL 139
Query: 435 EKKLKRLNLGGNELTAVPQKALALLRI*KNLKCKKIGLLLFQKGTLQG 578
L+ L L N L A+P+ L + L+ L F + TLQG
Sbjct: 140 -SSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSERTLQG 186
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 369 LEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQKALALLRI*KNLKCKKIGL 548
+ +L+LY N IS + AF+ L L+ LNLG N L+ +P+ L ++L L
Sbjct: 70 VSLLSLYNNLISTIHSNAFRNL-TALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRL 128
Query: 549 LLFQKGTLQG 578
+ T +G
Sbjct: 129 SSLPEDTFEG 138
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +3
Query: 330 TAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAV 485
T++ AF L +LE+L L +NRIS + G AF G + KL++LNL N L+ +
Sbjct: 98 TSILASAFNRLSSLEVLKLSKNRISTIRG-AFWG-QNKLQQLNLERNRLSHI 147
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 515 LKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQL 619
LK L + NRI IS+G F+ LR+L+ L L++N +
Sbjct: 158 LKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDI 192
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 342 NRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNEL 476
N F GL L L L NRI+ + AF GLE +K L L ++L
Sbjct: 200 NGPFRGLTNLASLRLDGNRITAIAATAFLGLE-NIKYLWLNTSQL 243
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 336 VHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQKAL 500
V F GL+ L+ + L N I V+ EAF+G K L +++ GN L VP +L
Sbjct: 110 VFKHYFSGLEDLKSVNLSRNVIECVEREAFEGC-KALSKVDFSGNRLIFVPWHSL 163
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 509 ENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFP 631
+NLK LE+ +N I + E DF LR L+ + L+ N + K P
Sbjct: 156 KNLKVLELGDNHIERLPE-DFGNLRKLEVVNLSQNNIEKLP 195
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 327 VTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQ 491
++ + + F L L+ L L EN+I V FKGL L++L+L N+L A+P+
Sbjct: 105 ISDIQDGTFENLRYLKQLNLGENKIRTVSASMFKGL-VSLEKLDLRFNDLKALPR 158
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 34.7 bits (76), Expect = 0.064
Identities = 23/82 (28%), Positives = 35/82 (42%)
Frame = +3
Query: 261 TIPTSSFTXXXXXXXXXXXXXKVTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEK 440
T+P++ ++A+ AF GLD L+ L L N IS+ +G + L
Sbjct: 118 TVPSNGLQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWEGNISRDL-P 176
Query: 441 KLKRLNLGGNELTAVPQKALAL 506
L+ L L GN + L L
Sbjct: 177 SLEILELDGNPVWKPTNNVLEL 198
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 500 GSSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFP 631
G NL++L +Q N I + + + L NL LGLAHN+L P
Sbjct: 66 GELVNLQELYLQHNSIELLPD-ELGNLVNLKRLGLAHNKLNDVP 108
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 512 NLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKF 628
N+K L + +N + I +GL++L L LA+N+LRK+
Sbjct: 51 NVKNLTLADNDLEEIGNASLSGLKSLLYLNLANNKLRKW 89
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 360 LDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQKALAL 506
L LE+L L NR+S + + G + L+ LNL GN+L A+P L L
Sbjct: 51 LKDLELLDLSYNRLSFIPADI--GKLRALRELNLEGNQLGAMPISTLFL 97
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 488 AKSAGSSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFPA 634
+ + G+ +L ++ N+I I EG F L NL +L + ++RK PA
Sbjct: 197 SSTLGNLPSLTLFDISFNKIEEIEEGSFLELPNLSTLHMNDCKIRKIPA 245
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 491 KSAGSSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFPA 634
K S+EN+ +L + + I++I+ G FAG L +L L N + A
Sbjct: 62 KDISSTENITELTVASSNISTITGGVFAGFTALRNLSLTFNNIHTIRA 109
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 327 VTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNE 473
+ + R F GL+ LE L + +NRIS + + L + L L++ GN+
Sbjct: 104 IHTIRARGFAGLNKLEYLNMSDNRISTWEIDRDTEL-RSLVVLDISGNK 151
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 10 LRSFLDLFIVFPYSWLFQYQ*LGFALFKNNIASQYL 117
L+ +D+F V+ SWL+ YQ +GF L K +L
Sbjct: 871 LKINVDIFTVYLNSWLYSYQIIGFLLQKGEGLDSFL 906
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 512 NLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQL 619
+LKKL++ NRI SI L NL++L LA N++
Sbjct: 486 SLKKLDLSRNRIKSI-PAQIEELSNLETLNLASNKI 520
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 494 SAGSSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFPA 634
S + + + ++ N I + E + L+NL SL L+ N+ FPA
Sbjct: 11 SLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPA 57
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 500 GSSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFP 631
GS +L +L + N+I+ + E D L NL+ L L++N L+K P
Sbjct: 297 GSWISLVELNVATNQISKLPE-DIQWLVNLEVLILSNNLLKKLP 339
>SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 140 DYTLRVKNKYWLAMLFLNKAKPSYWYWK 57
D L + ++WL LFL KA W+WK
Sbjct: 31 DSILELTVEFWLHALFLVKALTMIWHWK 58
>SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37)
Length = 1481
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 491 KSAGSSENLKKLEMQENRI-TSISEGDFAGLRNLDSLGLAHNQLRKF 628
K + S NLK+ M+E++I ++SEG +G R L + N LRK+
Sbjct: 877 KKSNSDSNLKRTAMEESKIKRTLSEGRASGRRLLRKIS-EDNILRKY 922
>SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06)
Length = 150
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 378 LTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQ 491
L L EN++ V +GL + ++ LNL NE+T++P+
Sbjct: 51 LDLSENKL--VSFPDLQGLAENVENLNLANNEITSIPE 86
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 500 GSSENLKKLEMQENRITSISEGDFAGLRNLDSLG 601
G +EN++ L + N ITSI EG L+ LG
Sbjct: 66 GLAENVENLNLANNEITSIPEGFLENSPRLNELG 99
>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
Length = 497
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 345 RAFVGLDTLEILTLYENRISVVDGEAFKGLEKK---LKRLNLGGNELTAVPQKAL 500
RA T+E L L ENR+ E+F + K + LNL GN +++ KA+
Sbjct: 129 RALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLAGNAMSSRGAKAM 183
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 515 LKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFPA 634
+ + ++ N I + E + L+NL SL L+ N+ FPA
Sbjct: 287 IDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPA 326
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 500 GSSENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFP 631
GS +L +L + N+I+ + E D L NL+ L L++N L+K P
Sbjct: 722 GSWISLVELNVATNQISKLPE-DIQWLVNLEVLILSNNLLKKLP 764
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 28.7 bits (61), Expect = 4.2
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -3
Query: 201 NLPINLQYGGIYAPIV 154
N+P+N+QYG +Y P++
Sbjct: 661 NVPVNIQYGSLYQPLL 676
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 324 KVTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLE 437
+++ + AF L LEI+ L EN I + AFKGL+
Sbjct: 138 QISNLVENAFQQLPNLEIMRLPENGIKRISVNAFKGLK 175
>SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39)
Length = 587
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 381 TLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQKALALLR 512
TL NRI+ V+ FKG+ K L+ L+L N +P + +R
Sbjct: 12 TLEGNRITEVNDNTFKGV-KSLETLDLSENLFVRLPSAGMQQIR 54
>SB_26630| Best HMM Match : ig (HMM E-Value=0.0021)
Length = 333
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 413 WRGFQRIGKEA*AIKSWRQ*IDGGPAKSAGSSENLKKLEMQE 538
WR G+E A+ W+Q + GGP SS + K L +
Sbjct: 28 WRVTLNSGEEVGAVNIWQQPVAGGPLSQMYSSTSGKTLAFSD 69
>SB_24472| Best HMM Match : I-set (HMM E-Value=0)
Length = 473
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 518 KKLEMQENRITSISEGDFAGLRNLDSLGLAHNQL 619
K +++ N I+ + GD AGL L +L L N+L
Sbjct: 18 KYKDLRFNNISEVKRGDLAGLHYLTTLRLDSNEL 51
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 170 MPPYCKFIGKLNES*NATS*LSWTSPRIAGHNTDIF 277
MPPY KFI +L+ S T + P+ + + +IF
Sbjct: 1071 MPPYVKFIDELSRSSQLTQKVMEAGPKFSLQSGEIF 1106
>SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)
Length = 544
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = -2
Query: 484 TAVNSLPPRFNRLSFFSNPLKASPSTTEILFSYRVSISRVSSPTNALLC-TAVTLL*FMF 308
TA+ L FF + K+S + +E L +Y S + + LLC T
Sbjct: 405 TALKETRDLLTSLGFFIHESKSSVTPSEELNAYLSRTSSIRTSQQLLLCYTKPYGPASRE 464
Query: 307 SMSRWLRCVNEDVG----IVASYSGRRPAESA 224
++SRW++ V + G I S+S R A SA
Sbjct: 465 TISRWIKQVMKGAGIDTEIFKSHSTRSAATSA 496
>SB_41446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = -1
Query: 398 PIFIQSQYL*GIKSDECSVVYRGHLVMIHVQ----YEQVVEMRERRCRYCGQLF 249
P +I Y+ + S + SV +++M + YE + R R+C CG F
Sbjct: 256 PFWIIRVYIWWVFSQDVSVFIAKNIIMTVIYSMDIYESLTSERPRKCEICGNSF 309
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 512 NLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLRKFP 631
NL+ +++ N+I I + L NL+SL L +NQL P
Sbjct: 374 NLRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQLTILP 413
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 512 NLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLR 622
NL+KLE+ +NRI+S + + G L L L+ N+++
Sbjct: 61 NLRKLELSDNRISSGLQ-NLTGSPKLTHLSLSGNKIK 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,964,440
Number of Sequences: 59808
Number of extensions: 377786
Number of successful extensions: 4509
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4506
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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