Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060806.seq
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5915 Cluster: PREDICTED: similar to ENSANGP000...    44   0.002
UniRef50_UPI0000DB79F8 Cluster: PREDICTED: similar to bric a bra...    44   0.002
UniRef50_UPI0000D55ED5 Cluster: PREDICTED: similar to CG9097-PB,...    43   0.005
UniRef50_Q7KF43 Cluster: Ribbon; n=2; Sophophora|Rep: Ribbon - D...    35   1.2  
UniRef50_Q7PZG9 Cluster: ENSANGP00000008749; n=2; Culicidae|Rep:...    33   2.8  
UniRef50_A6UTB0 Cluster: TPR repeat-containing protein; n=1; Met...    32   6.5  
UniRef50_P74119 Cluster: Sll1885 protein; n=1; Synechocystis sp....    32   8.6  

>UniRef50_UPI00015B5915 Cluster: PREDICTED: similar to
           ENSANGP00000014060; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000014060 - Nasonia
           vitripennis
          Length = 511

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +3

Query: 150 KKYLQYTXXDLRXGVEAVRNNRMSRLEAAEFYNVPGR 260
           K+Y QYT  +++  ++AVRN RMS L+AA  Y VP R
Sbjct: 336 KRYKQYTRENIQEAMDAVRNKRMSALQAARKYGVPSR 372


>UniRef50_UPI0000DB79F8 Cluster: PREDICTED: similar to bric a brac 1
           CG9097-PB, isoform B; n=1; Apis mellifera|Rep:
           PREDICTED: similar to bric a brac 1 CG9097-PB, isoform B
           - Apis mellifera
          Length = 504

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +3

Query: 36  YDEVEYLEEDVTNNSQPEKDPITVCLTRPKXLPRAKPI-KKYLQYTXXDLRXGVEAVRNN 212
           Y +V  ++ED    S P+     V       +P  KP  K+Y QYT  D+   +EAVR+ 
Sbjct: 295 YTDVSIMDED-DKQSSPQSYAPDVKPEMINYVPVQKPEWKRYKQYTRNDIMSAIEAVRSG 353

Query: 213 RMSRLEAAEFYNVPGR 260
            MS L+AA  Y VP R
Sbjct: 354 -MSALQAARKYGVPSR 368


>UniRef50_UPI0000D55ED5 Cluster: PREDICTED: similar to CG9097-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG9097-PB, isoform B - Tribolium castaneum
          Length = 605

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +3

Query: 129 LPRAKPI-KKYLQYTXXDLRXGVEAVRNNRMSRLEAAEFYNVPGR 260
           +P  KP  K+Y QYT  D+   +EAVRN  MS L+AA  Y VP R
Sbjct: 363 VPNQKPEWKRYKQYTREDIMSAIEAVRNG-MSALQAARKYGVPSR 406


>UniRef50_Q7KF43 Cluster: Ribbon; n=2; Sophophora|Rep: Ribbon -
           Drosophila melanogaster (Fruit fly)
          Length = 661

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +3

Query: 150 KKYLQYTXXDLRXGVEAVRNNRMSRLEAAEFYNVPGR 260
           K+Y QYT  D+   ++AVR   MS L+A+  Y +P R
Sbjct: 367 KRYKQYTRADMMCAIQAVREG-MSALQASRKYGLPSR 402


>UniRef50_Q7PZG9 Cluster: ENSANGP00000008749; n=2; Culicidae|Rep:
           ENSANGP00000008749 - Anopheles gambiae str. PEST
          Length = 529

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 150 KKYLQYTXXDLRXGVEAVRNNRMSRLEAAEFYNVPGR 260
           K+Y QYT  D+   +E VR   MS L+A+  + VP R
Sbjct: 368 KRYKQYTRTDILNAIECVRKG-MSALQASRKFGVPSR 403


>UniRef50_A6UTB0 Cluster: TPR repeat-containing protein; n=1;
           Methanococcus aeolicus Nankai-3|Rep: TPR
           repeat-containing protein - Methanococcus aeolicus
           Nankai-3
          Length = 470

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +3

Query: 27  KKTYDEVEYLEEDVTNNSQPEKDPITVCLTRPKXLPRAKPIKKYLQYTXXDLRXGVEAVR 206
           KK YDE     ++ + N  P+K+   VC+   +     K   K ++Y    LR G + ++
Sbjct: 52  KKDYDEAIKNYKEASKNDYPDKEKWIVCINLGQCYNSKKEYDKAIEYYKKGLRLGGKEIK 111


>UniRef50_P74119 Cluster: Sll1885 protein; n=1; Synechocystis sp.
           PCC 6803|Rep: Sll1885 protein - Synechocystis sp.
           (strain PCC 6803)
          Length = 845

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 24  EKKTYDEVEYLEEDVTNNSQPEKDPITVCLTR 119
           E +T D VE+++E+V   S PE+  IT  L R
Sbjct: 317 ETETLDTVEFVQEEVVEESPPEESEITTPLLR 348


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,841,822
Number of Sequences: 1657284
Number of extensions: 5736962
Number of successful extensions: 12080
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12072
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)