Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060806.seq
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021997-1|AAH21997.1|  619|Homo sapiens zinc finger protein 668...    29   9.3  
AK027398-1|BAB55084.1|  619|Homo sapiens protein ( Homo sapiens ...    29   9.3  
AK023541-1|BAB14602.1|  498|Homo sapiens protein ( Homo sapiens ...    29   9.3  
AB209710-1|BAD92947.1|  624|Homo sapiens Hypothetical protein FL...    29   9.3  

>BC021997-1|AAH21997.1|  619|Homo sapiens zinc finger protein 668
           protein.
          Length = 619

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 380 SXISXYSCAYCTXVYFHAADDLRXHTRTGP 469
           S +  Y+C +C   +  +A DLR H RT P
Sbjct: 567 SSVRPYTCPHCPKAFL-SASDLRKHERTHP 595


>AK027398-1|BAB55084.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14492 fis, clone MAMMA1002937, weakly similar to
           ZINC FINGER PROTEIN 135. ).
          Length = 619

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 380 SXISXYSCAYCTXVYFHAADDLRXHTRTGP 469
           S +  Y+C +C   +  +A DLR H RT P
Sbjct: 567 SSVRPYTCPHCPKAFL-SASDLRKHERTHP 595


>AK023541-1|BAB14602.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13479 fis, clone PLACE1003738, weakly similar to
           ZINC FINGER PROTEIN 135. ).
          Length = 498

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 380 SXISXYSCAYCTXVYFHAADDLRXHTRTGP 469
           S +  Y+C +C   +  +A DLR H RT P
Sbjct: 446 SSVRPYTCPHCPKAFL-SASDLRKHERTHP 474


>AB209710-1|BAD92947.1|  624|Homo sapiens Hypothetical protein
           FLJ14492 variant protein.
          Length = 624

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 380 SXISXYSCAYCTXVYFHAADDLRXHTRTGP 469
           S +  Y+C +C   +  +A DLR H RT P
Sbjct: 572 SSVRPYTCPHCPKAFL-SASDLRKHERTHP 600


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,638,473
Number of Sequences: 237096
Number of extensions: 885436
Number of successful extensions: 2151
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)