Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060805.seq
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.8  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   4.8  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    23   6.3  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   6.3  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 135  VVCKSAIKQKTQLNGNGVVIFEQSNF 212
            V CK  +     LN +G V+F  + F
Sbjct: 1487 VACKRLVSMNMPLNSDGTVLFNATLF 1512


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 299 MDPRVLDVMLPYLVSYHGNPHS 364
           M+P  L V   +  +YHGN H+
Sbjct: 348 MEPSALSVNSQFYGNYHGNLHN 369


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +2

Query: 290 TTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEKAREQVANLIN-AEPKEIIFT 466
           T P   +V ++++   + YH   +  TH +G+    +V        NL+         FT
Sbjct: 7   TLPSCAKVYEIVIQNSLMYHCRSYISTHQHGFFPRRSV------TTNLVKFVSNCHAAFT 60

Query: 467 SGATESNNISVKGVVDFMHQEKSMSLLLKL 556
           SGA + + + +K   D ++    ++ L ++
Sbjct: 61  SGA-QMDAVYLKAAFDRVNHRLLLAKLARI 89


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/44 (22%), Positives = 18/44 (40%)
 Frame = +2

Query: 377 YGWESEAAVEKAREQVANLINAEPKEIIFTSGATESNNISVKGV 508
           + W     +E+    +  L +  PKE+          N ++KGV
Sbjct: 126 FDWNDYHTLEEIHAWLDQLASEHPKEVELLDAGRSHQNRTMKGV 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,003
Number of Sequences: 2352
Number of extensions: 13166
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)