Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060805.seq
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113363-1|AAM29368.1|  462|Drosophila melanogaster LD22661p pro...   160   1e-39
AE014134-2129|AAF53143.1|  462|Drosophila melanogaster CG12264-P...   160   1e-39
AE014134-2126|AAN10795.1|  123|Drosophila melanogaster CG31864-P...    63   3e-10

>AY113363-1|AAM29368.1|  462|Drosophila melanogaster LD22661p
           protein.
          Length = 462

 Score =  160 bits (389), Expect = 1e-39
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = +2

Query: 260 GRPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEKAREQVANLIN 439
           GRPLY DAQATTPMDPRVLD MLPYL +++GNPHSRTHAYGWE+E+AVEKAREQVA LI 
Sbjct: 61  GRPLYLDAQATTPMDPRVLDAMLPYLTNFYGNPHSRTHAYGWETESAVEKAREQVATLIG 120

Query: 440 AEPKEIIFTSGATESNNISVKGVVDFMHQEK 532
           A+PKEIIFTSGATESNNI+VKGV  F   +K
Sbjct: 121 ADPKEIIFTSGATESNNIAVKGVARFYGTKK 151



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +1

Query: 511 RFYAPRKKHVITTQIEHKCVLDSCRALEGEGFRITYLPV 627
           RFY  +K+HVITTQ EHKCVLDSCRALE EGF++TYLPV
Sbjct: 145 RFYGTKKRHVITTQTEHKCVLDSCRALENEGFKVTYLPV 183


>AE014134-2129|AAF53143.1|  462|Drosophila melanogaster CG12264-PA
           protein.
          Length = 462

 Score =  160 bits (389), Expect = 1e-39
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = +2

Query: 260 GRPLYFDAQATTPMDPRVLDVMLPYLVSYHGNPHSRTHAYGWESEAAVEKAREQVANLIN 439
           GRPLY DAQATTPMDPRVLD MLPYL +++GNPHSRTHAYGWE+E+AVEKAREQVA LI 
Sbjct: 61  GRPLYLDAQATTPMDPRVLDAMLPYLTNFYGNPHSRTHAYGWETESAVEKAREQVATLIG 120

Query: 440 AEPKEIIFTSGATESNNISVKGVVDFMHQEK 532
           A+PKEIIFTSGATESNNI+VKGV  F   +K
Sbjct: 121 ADPKEIIFTSGATESNNIAVKGVARFYGTKK 151



 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +1

Query: 511 RFYAPRKKHVITTQIEHKCVLDSCRALEGEGFRITYLPV 627
           RFY  +K+HVITTQ EHKCVLDSCRALE EGF++TYLPV
Sbjct: 145 RFYGTKKRHVITTQTEHKCVLDSCRALENEGFKVTYLPV 183


>AE014134-2126|AAN10795.1|  123|Drosophila melanogaster CG31864-PA
           protein.
          Length = 123

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 260 GRPLYFDAQATTPMDPRVLDVMLPYLVSYHGN 355
           GRPLY DAQATTPMDPRVLD MLPYL +++GN
Sbjct: 61  GRPLYLDAQATTPMDPRVLDAMLPYLTNFYGN 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,618,592
Number of Sequences: 53049
Number of extensions: 582533
Number of successful extensions: 1465
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)